Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00341 ATGAGTGCCACCAACTCTAAGAAGCTTTCTTCTCCTTCACCTACCATTCACCAACGTAGGCTCACCCGACAGAGGAAGCTTCGTTACCTCACTGACAAAGACGCTGGTCTGCATTCAACTTCCTCTCTACCCGCTTCTCCTCTTCCTTCCTTTAAGTCCGCTTCCAGTTCCGACCATTGGTCTTCCTCTGCGGTTCCTCAACCCCTTCCGCGTCCCGATTCCCCGTTGACCCGCCGACACGACCATCATCACCTCGGATCTCCCCCTTTCGAACATCCTGCTTTCGCTTTTCACAGAAGGTCGGTTGATCATGATCCTGTGAGGAGTTTAAGGTCTGCGAGCAATTTGAGTAGACCTTCTTTTGATCCGGCGACTCCAAATGCTAAATTTGATTTGAGAGTAAATATTCCGCCTGCAAGAGTGTTGGCAGGCAATACTAGTTCGTGTAAAGATCATAGAGAACTCTCTCATGACAATGACTCTGAAAATGTTTCCAACTTGAGATTGCATTTTGCGGCCAAGAGTGCCCCCAACAGCATATTCTCCAGTCCTGTTACTAGTCCACGTAGATCCAGCAATGTAGATTTCTATGATCCTTCCATAATTTTTCCTCAAGATTTTAATGACATTTTGAAAGTGTCACCGGCTAAAACTGCTCAGAGTCCAGACCTGTCTCCTCTGCGCAGCCCTGGGAGTCACCTCAATCAAGAGGGGTCTCAGCTTCGTAAATTTAGCTCCAGAGTGTGGCCTGAAAATAATCATGTGGATGCACATCCACATCCACATCCACTGCCCCTTCCTCCTAGAGCTTCACCACAGACCACACACTCATCTCCGCAGCAACAACCAACTATGGCAAACCTCACCACTGAAAACTCACCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGCGGATCATATGGATCTGTTTATCATGCAACCAACTTAGAGACTGGAGCCTCGTGTGCAATGAAAGAGGTGGATCTGTTCCCTGATGATCCTAAATCTGCTGACTGCATAAAGCAACTTGAGCAGGAAATCAGAATTCTCCGTCAGTTACACCACCCCAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGTGATCGATTGTACATATATATGGAGTATGTTCATCCTGGATCACTTCATAAGTTTATGCATGAACATTGTGGAGCTATGACAGAGTCCGTGGTTCGCAATTTCACACGACATATTCTCTCTGGATTGGCATACTTACATGGTACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTCGATGCATCAGGCAGTGTTAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGAAGTCCCTACTGGATGGCTCCTGAGCTCATGAAGGCTGCCATAAAGAAAGAATCCAGTCCTGACATTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACTATCATCGAAATGCTGACAGGAAAACCTCCTTGGAGCGAATTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAAATCCCCGGATATACCTGAAAGTTTGTCTTCAGAGGGACAGGATTTCCTTCAGCAGTGTTTCAAAAGGAATCCAGCAGAACGACCATCAGCAGCAGTGCTTCTTACACACGCCTTTGTACAAAATTTGCATGAGCAAGATGTTCAAGTTCATTCACAAGGGCAAAGCTGTCCCAGAGGAGACGCTGGACCAGGAGATGATTCACGTAGGCATAGTCCCAGTAACAGTTCAAGAAACAGCCGTGGCGTAGTGTCAGCATCCTTTCGCGCACGGTTATTTAACAAAATTCATAATTTAATAGGTGACACTTCAAAAAAATATGATTTCGAGGATTCTAATCATGTCACATCTTCTCGTGATTCTCCTTGA 1932 0.4555 MSATNSKKLSSPSPTIHQRRLTRQRKLRYLTDKDAGLHSTSSLPASPLPSFKSASSSDHWSSSAVPQPLPRPDSPLTRRHDHHHLGSPPFEHPAFAFHRRSVDHDPVRSLRSASNLSRPSFDPATPNAKFDLRVNIPPARVLAGNTSSCKDHRELSHDNDSENVSNLRLHFAAKSAPNSIFSSPVTSPRRSSNVDFYDPSIIFPQDFNDILKVSPAKTAQSPDLSPLRSPGSHLNQEGSQLRKFSSRVWPENNHVDAHPHPHPLPLPPRASPQTTHSSPQQQPTMANLTTENSPSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVDLFPDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSEIVGDRLYIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTRHILSGLAYLHGTKTIHRDIKGANLLVDASGSVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESSPDIAMAIDIWSLGCTIIEMLTGKPPWSEFEGPQAMFKVLHKSPDIPESLSSEGQDFLQQCFKRNPAERPSAAVLLTHAFVQNLHEQDVQVHSQGQSCPRGDAGPGDDSRRHSPSNSSRNSRGVVSASFRARLFNKIHNLIGDTSKKYDFEDSNHVTSSRDSP 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00341 643 MobiDBLite consensus disorder prediction 218 247 - -
Gma04g00341 643 MobiDBLite consensus disorder prediction 273 299 - -
Gma04g00341 643 ProSiteProfiles Protein kinase domain profile. 300 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00341 643 MobiDBLite consensus disorder prediction 1 92 - -
Gma04g00341 643 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 7 641 - -
Gma04g00341 643 SMART serkin_6 300 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00341 643 ProSitePatterns Protein kinases ATP-binding region signature. 306 329 IPR017441 GO:0005524
Gma04g00341 643 MobiDBLite consensus disorder prediction 74 88 - -
Gma04g00341 643 MobiDBLite consensus disorder prediction 570 604 - -
Gma04g00341 643 SUPERFAMILY Protein kinase-like (PK-like) 277 570 IPR011009 -
Gma04g00341 643 MobiDBLite consensus disorder prediction 218 301 - -
Gma04g00341 643 MobiDBLite consensus disorder prediction 1 18 - -
Gma04g00341 643 Gene3D Transferase(Phosphotransferase) domain 1 297 587 - -
Gma04g00341 643 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 7 641 - -
Gma04g00341 643 MobiDBLite consensus disorder prediction 108 122 - -
Gma04g00341 643 MobiDBLite consensus disorder prediction 106 129 - -
Gma04g00341 643 MobiDBLite consensus disorder prediction 35 64 - -
Gma04g00341 643 Pfam Protein kinase domain 301 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00341 Gma-Chr4 2916966 2923060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00341 16 563 MAP Kinase Kinase Kinase AT5G66850 46.218 2.03e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma04g00341 Pkinase 3.5e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00341 04 2916966 2923060 Gma04g00341 04 2916966 2923060 ECH
Gma04g00341 04 2916966 2923060 Gma06g00328 06 2845527 2851753 GST
Gma17g02349 17 41497961 41503006 Gma04g00341 04 2916966 2923060 PCT
Gma14g00691 14 6912346 6919105 Gma04g00341 04 2916966 2923060 PCT
Gma04g00341 04 2916966 2923060 Gma17g02349 17 41497961 41503006 PCT
Gma04g00341 04 2916966 2923060 Gma14g00691 14 6912346 6919105 PCT