Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00328 ATGGCGAAATCGAGCGCCGACGATGCGGAGCTACGGCGAGCTTGCGAGCATGCCATTGAAGGCACGAAGCACAAGGTCGTTCTCTCCATTCGAACCGTCAAGACTCACGGCACTTGGGGAAAAACTGCTAAGCTTGGTCGTCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTGCACCAAAGCCAAAGTTCAGCGGACTAAAGCTTTTCTACGAGTTTTAAAGTATTCCAACGGAGGAGTTCTTGAGGTAATTAATGTCCTCCACTGGAGGTTTTGGCATATTTCTATTGGCTATAAAATAAAATTTATTGTGTTGCTGCAGCCTGCTAAGTTATACAAGCTGAAGCACCTCTCAAAAATGGAAGTTGCAACAAATGATCCCAGTGGATGTACATTTACACTGGGGTTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCACAGTGGACAATGCGCAATGTCGATGACAGAAATCGCCTCCTGTTTGGTATCTTAAATATCTGCAAAGATATCCTTGGTCGCCTGCCTAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCGCAGTTTCCACTCAAAATAACCAACAAGATGGCACTTCTGTTGAATCTACTGCGGCTGAAACAGAATTGAAAGTCTATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTCTTGGAACTTATATCATGGGTATTGGTGAAGCCGAGGCATTTTCTGAAAGGTTAAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTCTGATAGATGAGGTGTTGCAAGGGCTTGAAGCAGCATCAAATTGCGTGGAAGACATGGATGAATGGTTAGGCATGTTCAATGTAAAGCTTCGACACATGAGGGAAGATATTGAATCAATTGAAACCCGCAATAACAAGTTGGAAATGCAAAATGTGAATAACAGAACTCTTATTCAAGAGCTTGATAAGCTTCTTGAGCAATTGAGTATCCCTTCTGAGTATTCAGCATGTTTGACAGGAGATTCATTTGATGAAGCACAAATGCTGCAAAATATGGAAGCATGTGAGTGGTTGACAACTGCCATGCGTGGTCTTGAAGTGCCTAACATAGATCCTACTTATGCAAAAATGAGAGCAGTTAAAGAGAAGCGAGGAGAACTTCAAATAATAAAGTCTGTTTTTGTTGGGAAGGCTTCTGAATACTTGAGAAGTTACTTCGCTAGTTTTGTGGATTTCATGTTAAATGATAAAAATTACTTTTCTCAGCGGGGACAGTTGAAAAGGCCAGATCATGCTGATTTGAGGTACAAGTGCAGGACATATGCACGCCTTCTGAAGCATTTAAAGATTCTTGATAAGAATTGCTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGCGAGTTTGCTAATGAACTTCGTGCTAGTGCTAAAACTTCCAAAACCCCAACTGTTTGGGAAGGCTTCATGGGTTCTGGTCAAAATGTAAATTCTGCTGACACTGCAGCAGTTTCTGAAGCGTATGCAAAGATACTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCATTTTTTGCACACTTCATGTGCTTTGAAGTTCCCTCACTTGTTGATGGTAATAAAACTGGACACAATGACCAGAAAAATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGTAAAAATTCTGTGGATTTTGCAGCTTTAAATGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCGCTGCTGTTGTGGATTGGGCACACAAAATTGATCCTTTATGCTGCATATCAATGCATGGAACTACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGCATTTTGCTTGGTGATCTAGAGTCTCGCATATCTATGCAGTTCAGCCGTTTTGTGGATGAAGCTTGCCATCAGATTGAAAGAAGTGAGCGCAATGCTCGCCAAACGGGTGTCCTACCGTACATTCCTAGATTTGCATCCCTTGCAACACGGATGGAGCAGTATGTTGCAGGACAGTCGAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAAAAATGCACAAACAGATCCCAAGTATGCAGACATTTTTCTTATTGAAAACTATGCCGCATTTCAGAATAGTTTGTATGACCTTGCAAATGTCGTTCCCACTTTGGCGAAGTTTTATCATCAGGCTAGTGAAGCCTACGAGCAAGCTTGCACACGCCATATTAGTGTGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAAGATTGAGGACTTGATATTGAATAATGTTGCACCTGAAGAGATTCCTTTCCAAGTTGGGCTGTCAAAAGCAGATCTACGGAAGACGTTAAAATCCAGTTTATCCGGGGTGGACAAGTCCATTGCTGCGATGTATAAGAAGTTGCATAAAAACTTGACTTCGGAGGAACTCTTACCTTCCTTGTGGAATAAATGCAAGAATGATTTTCTTGATAAGTACGAAACCTTTGTCCAACTTGTCGCGAGGATTTACCCTGCTGAATCAGTCCCTTCTGTAGCAGAGTTGCGAGACCTTTTAGCTTCCATGTAA 2709 0.4227 MAKSSADDAELRRACEHAIEGTKHKVVLSIRTVKTHGTWGKTAKLGRQMAKPRVLALCTKAKVQRTKAFLRVLKYSNGGVLEVINVLHWRFWHISIGYKIKFIVLLQPAKLYKLKHLSKMEVATNDPSGCTFTLGFDNLRSQSVAPPQWTMRNVDDRNRLLFGILNICKDILGRLPKVVGIDVVEMALWAKENTPAVSTQNNQQDGTSVESTAAETELKVYVEKELVSQAEEEDMEALLGTYIMGIGEAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAASNCVEDMDEWLGMFNVKLRHMREDIESIETRNNKLEMQNVNNRTLIQELDKLLEQLSIPSEYSACLTGDSFDEAQMLQNMEACEWLTTAMRGLEVPNIDPTYAKMRAVKEKRGELQIIKSVFVGKASEYLRSYFASFVDFMLNDKNYFSQRGQLKRPDHADLRYKCRTYARLLKHLKILDKNCLGPLRKAYCSSLNLLLRREAREFANELRASAKTSKTPTVWEGFMGSGQNVNSADTAAVSEAYAKILTIFIPLLVDESSFFAHFMCFEVPSLVDGNKTGHNDQKNDDDLGIMDIDENDSKNSVDFAALNESLQDLLDGIQEDFAAVVDWAHKIDPLCCISMHGTTERYLSGQKADAAGFVRILLGDLESRISMQFSRFVDEACHQIERSERNARQTGVLPYIPRFASLATRMEQYVAGQSRDLVDQAYTKFVSIMFVTLEKNAQTDPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISVIIYYQFERLFQFARKIEDLILNNVAPEEIPFQVGLSKADLRKTLKSSLSGVDKSIAAMYKKLHKNLTSEELLPSLWNKCKNDFLDKYETFVQLVARIYPAESVPSVAELRDLLASM 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00328 902 Coils Coil 306 343 - -
Gma04g00328 902 PANTHER SEC3/SYNTAXIN-RELATED 105 902 - -
Gma04g00328 902 PANTHER SEC3/SYNTAXIN-RELATED 1 87 - -
Gma04g00328 902 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 105 902 - -
Gma04g00328 902 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 87 - -
Gma04g00328 902 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 107 169 IPR028258 -
Gma04g00328 902 SMART Sec3_PIP2_bind_2 48 171 IPR028258 -
Gma04g00328 902 Coils Coil 246 273 - -
Gma04g00328 902 Pfam Exocyst complex component Sec3 249 517 IPR019160 GO:0000145|GO:0006887
Gma04g00328 902 Pfam Exocyst complex component Sec3 527 885 IPR019160 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00328 Gma-Chr4 2808577 2821615 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00328 04 2808577 2821615 Gma04g00328 04 2808577 2821615 ECH
Gma04g00328 04 2808577 2821615 Gma06g00314 06 2742868 2744583 GST
Gma17g02361 17 41664221 41679399 Gma04g00328 04 2808577 2821615 PCT
Gma14g00676 14 6645488 6650850 Gma04g00328 04 2808577 2821615 PCT
Gma04g00328 04 2808577 2821615 Gma17g02361 17 41664221 41679399 PCT
Gma04g00328 04 2808577 2821615 Gma14g00676 14 6645488 6650850 PCT