Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00300 ATGGCCTCAAGCCAGGGTTGGACTCCGAAGCAGAACAAGAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGATAGGTGGCACACGGTGGCCAGGGCCGTCGGAGGAAAAACGGTGGAGGAAGTGAAAAGGCATTATGAGAAGCTCGTGGAAGATGTGAAGAAGATAGAGGAAGGTCACGTGCCCCTCCCCAATTACCGAAGTGCTGCAAGAGGCTACGGTTACATGGATGAAGAAACCAGGATGAAGGCTCTGAGTCTGCAGTGA 276 0.529 MASSQGWTPKQNKRFENALAIFDKDTPDRWHTVARAVGGKTVEEVKRHYEKLVEDVKKIEEGHVPLPNYRSAARGYGYMDEETRMKALSLQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00300 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 91 - -
Gma04g00300 91 CDD SANT 7 53 IPR001005 -
Gma04g00300 91 ProSiteProfiles Myb-like domain profile. 7 53 IPR001005 -
Gma04g00300 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Gma04g00300 91 Gene3D - 1 66 - -
Gma04g00300 91 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Gma04g00300 91 SMART sant 3 55 IPR001005 -
Gma04g00300 91 Coils Coil 42 62 - -
Gma04g00300 91 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Gma04g00300 91 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00300 Gma-Chr4 2571151 2571808 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma04g00300 Myb_DNA-binding 3.2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00300 04 2571151 2571808 Gma04g00300 04 2571151 2571808 ECH
Gma04g00300 04 2571151 2571808 Gma06g00286 06 2498301 2499049 GST
Gma14g00641 14 6233132 6234106 Gma04g00300 04 2571151 2571808 PCT
Gma04g00300 04 2571151 2571808 Gma14g00641 14 6233132 6234106 PCT