Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00271 ATGGATACCATTGCCAATTCAGTTTCGAAGCTACTCACATTGTTTCTCACGGTCTTGTTTGTGGGTTCTGAGCTGACACACTGTAATGTCACCTACGACAGAAAGTCTCTTCTCATCAATGGCCAGAGGAGAATCCTCATCTCTGGCTCCATTCACTATCCCAGAAGCACCCCTGAGATGTGGGAGGATCTAATTTGGAAGGCCAAACACGGAGGACTTGATGTCATAGACACTTATGTCTTCTGGGATGTCCATGAACCTTCTCCTGGCAATTACGATTTTGAAGGAAGGTATGATCTAGTACGGTTCATTAAGACGGTGCAGAAGGTGGGGCTTTATGCCAATCTTCGGATTGGACCTTATGTATGCGCTGAGTGGAACTTTGGAGGAATTCCTGTATGGTTGAAGTATGTTCCTGGCGTAAGCTTCAGAACGGATAATGAGCCTTTCAAGGCGGCAATGCAAGGTTTCACGCAGAAAATTGTCCAGATGATGAAGAGTGAGAAGTTGTTTCAATCTCAGGGTGGTCCAATCATTCTCTCTCAGATTGAGAATGAGTACGGGCCAGAGAGTAGGGGAGCTGCTGGCCGTGCATATGTAAACTGGGCTGCAAGTATGGCTGTTGGATTGGGTACAGGAGTGCCATGGGTGATGTGCAAGGAAAATGATGCCCCAGATCCTGTGATAAATTCATGTAATGGTTTTTACTGTGATGATTTCTCTCCAAATAAACCATACAAGCCTAGCATGTGGACCGAGACTTGGAGTGGCTGGTTTACAGAATTTGGCGGCCCAATTCACCAGCGACCAGTTGAGGATCTATCCTTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATATGTGAATTATTACATGTACCATGGAGGAACTAACTTTGGACGATCAGCTGGAGGCCCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATAGTCATTTGAAGGAGCTTCATAAAGCTATCAAGCGATGTGAACATGCTTTGGTGTCTTTGGATCCCACAGTTTTGTCATTAGGAACACTACTGCAGGCTCATGTATTCTCTTCAGGAACTGGAACATGTGCAGCTTTTCTAGCAAACTATAATGCACAGTCAGCTGCTACAGTGACATTCAATAACAGGCACTATGATTTACCTCCTTGGTCCATAAGCATCCTTCCTGATTGCAAAATTGATGTATTTAATACTGCAAAAGTGAGAGTTCAACCTTCACAGGTGAAAATGCTTCCTGTCAAACCAAAGTTGTTCTCCTGGGAGAGCTATGATGAAGATCTATCTTCTCTGGCCGAAAGTTCAAGGATTACAGCTCCTGGACTCTTAGAACAGCTGAACGTTACTAGAGATACCAGTGACTATCTATGGTACATAACCAGcgttgacataagttcatcagaatcctttcttcgaggcggacaaaaacccagcattaatgtgcagtctgcaggacatgctgttcatgtgtttgttaatgggcaattttcagggtcggctttcgggacaagggagcagagaagttgcacatataatggacctgttgacctacgcgctggagcaaataaaattgctcttctcagcgtgactgttggattacagaatgttggtcggcattatgaaacatgggaggcagggatcactggtccagttttgctccatggtcttgaccaaggacagaaagatttgacgtggaacaagtggtcatataagGTTGGCCTAAGAGGAGAGGCTATGAATTTGGTATCTCCCAATGGAGTCTCGTCTGTTGACTGGGTCCAAGAGTCACAAGCTACTCAAAGCCGGTCACAATTAAAATGGTACAAGgcatatTTTGATGCACCCGGGGGAAAGGAACCACTGGCTTTGGACCTTGAAAGCATGGGTAAGGGTCAAGTATGGATAAACGGGCAGAGCATAGggagatattggatggcttatgcaaagggtgactgtAATTCTTGCACTTATTCTGGGACCTTTCGGCCTGTAAAGTGCCAACTTGGCTGTGGACAACCCACTCAACGATGGTATCACGTTCCAAGGTCCTGGCTGAAGCCAACAAAGAACTTGATAGTAGTGTTTGAAGAATTAGGTGGAAATCCTTGGAAAATATCTTTGGTAAAGAGAGTGGCACATACTCCGGCAGTTCATGGGCAGTGA 2211 0.3718 MDTIANSVSKLLTLFLTVLFVGSELTHCNVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIWKAKHGGLDVIDTYVFWDVHEPSPGNYDFEGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPGVSFRTDNEPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESRGAAGRAYVNWAASMAVGLGTGVPWVMCKENDAPDPVINSCNGFYCDDFSPNKPYKPSMWTETWSGWFTEFGGPIHQRPVEDLSFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKELHKAIKRCEHALVSLDPTVLSLGTLLQAHVFSSGTGTCAAFLANYNAQSAATVTFNNRHYDLPPWSISILPDCKIDVFNTAKVRVQPSQVKMLPVKPKLFSWESYDEDLSSLAESSRITAPGLLEQLNVTRDTSDYLWYITSVDISSSESFLRGGQKPSINVQSAGHAVHVFVNGQFSGSAFGTREQRSCTYNGPVDLRAGANKIALLSVTVGLQNVGRHYETWEAGITGPVLLHGLDQGQKDLTWNKWSYKVGLRGEAMNLVSPNGVSSVDWVQESQATQSRSQLKWYKAYFDAPGGKEPLALDLESMGKGQVWINGQSIGRYWMAYAKGDCNSCTYSGTFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRVAHTPAVHGQ 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00271 736 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Gma04g00271 736 SUPERFAMILY Galactose-binding domain-like 581 724 IPR008979 -
Gma04g00271 736 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Gma04g00271 736 PANTHER BETA-GALACTOSIDASE 3 735 - -
Gma04g00271 736 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Gma04g00271 736 Gene3D - 438 586 - -
Gma04g00271 736 Gene3D Glycosidases 23 343 - -
Gma04g00271 736 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Gma04g00271 736 Gene3D - 594 730 - -
Gma04g00271 736 Pfam Glycosyl hydrolases family 35 36 339 IPR031330 -
Gma04g00271 736 PANTHER BETA-GALACTOSIDASE RELATED 3 735 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00271 Gma-Chr4 2354062 2359334 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00271 04 2354062 2359334 Gma04g00271 04 2354062 2359334 ECH
Gma04g00271 04 2354062 2359334 Gma06g00255 06 2261491 2265990 GST
Gma17g02426 17 42242658 42248436 Gma04g00271 04 2354062 2359334 PCT
Gma14g00608 14 5918753 5923276 Gma04g00271 04 2354062 2359334 PCT
Gma04g00271 04 2354062 2359334 Gma17g02426 17 42242658 42248436 PCT
Gma04g00271 04 2354062 2359334 Gma14g00608 14 5918753 5923276 PCT