Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00266 ATGCTGAAATCGGGCATTGGAATTGAGGAGAGGAAGCAATTGAAGAAGCCAGCACAAGCCAGCTCGAGAAAGGGTTGCATGAGAGGAAAAGGAGGTCCTGAGAATGCTAGTTGCACCTACAAAGGTGTGAGACAGAGAACATGGGGGAAATGGGTTGCTGAAATCCGTGAACCCAATCGAGGTGCTCGGCTCTGGCTCGGGACTTTTGAGACCTCTCATGAAGCTGCTTTGGCTTATGATGCTGCTGCACGTAAGCTTTATGGCTCTGATGCCAAACTCAATTTACCAGAACTCTCTATCAAATCTCAATCTCAGTGTCCACCACCATCACCACCACCACCTTCTTCTGTTACCAACAACACTCAAATGGAAAACCTGCAGCAGATTCAAAACAATTACATAGACATGGCTACGTGTTCTAATTTCAACAACATCAATAATCCAGAAGTTTCCATGGCCTCTCAGCAGGTTGGAGTTGGACCAATTTACACCAGTGACTCCATCGTGTCTCTTCCCTTGGACACCAATCCCAAGCCTGTGGAGAATGAGGTCGAGTTTCGTCCATCGTGGGCGACAATGAACGAGGGTTTGCCGGTTTTCGATGATTCCATTTGGGCTGAAGCTGCTATGTCTCTAGATTTTCCTCACATTGCAGCAGAGACTGCGATTTACGCGTCGGGGAACAACTTGGCTGATGTTGGTGTTTGGGACTCTCTGCAAACCCCATGGTGCATGTAA 738 0.4783 MLKSGIGIEERKQLKKPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSDAKLNLPELSIKSQSQCPPPSPPPPSSVTNNTQMENLQQIQNNYIDMATCSNFNNINNPEVSMASQQVGVGPIYTSDSIVSLPLDTNPKPVENEVEFRPSWATMNEGLPVFDDSIWAEAAMSLDFPHIAAETAIYASGNNLADVGVWDSLQTPWCM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00266 245 MobiDBLite consensus disorder prediction 101 120 - -
Gma04g00266 245 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Gma04g00266 245 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Gma04g00266 245 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Gma04g00266 245 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Gma04g00266 245 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Gma04g00266 245 MobiDBLite consensus disorder prediction 1 17 - -
Gma04g00266 245 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 14 236 - -
Gma04g00266 245 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Gma04g00266 245 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Gma04g00266 245 MobiDBLite consensus disorder prediction 1 34 - -
Gma04g00266 245 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 14 236 - -
Gma04g00266 245 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00266 Gma-Chr4 2335103 2335840 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma04g00266 AP2 7.6e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00266 04 2335103 2335840 Gma04g00266 04 2335103 2335840 ECH
Gma04g00266 04 2335103 2335840 Gma06g00251 06 2240520 2242870 GST
Gma17g02431 17 42280166 42281029 Gma04g00266 04 2335103 2335840 PCT
Gma14g00602 14 5880363 5881214 Gma04g00266 04 2335103 2335840 PCT
Gma04g00266 04 2335103 2335840 Gma17g02431 17 42280166 42281029 PCT
Gma04g00266 04 2335103 2335840 Gma14g00602 14 5880363 5881214 PCT