Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00239 ATGGATCGACGCTGGCCTTGGAAGAAAAAATCATCTGAAAAGTCCGTGATTGAGAAAGCAACTACTGCATTGGATTCCTCCGATGCTTCTAACAACCAGGATAACAAGAAGAAACCAAACTATGTTCAAATTTCTGTGGAATCCTATTCACATCTGTCTGGTTTGGAAGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACACTGGAAGATGAGATAAAGGAAATGAATGAAAAGCTGTCCGCAGCAAACTCTGAGATCAATACCAAGGAAAGCATGGTAAAGCAACATGCTAAAGTGGCTGAAGAAGCTGTATCAGGCTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTAGAATCTGTCACCCTTTTAAAACTCACTGCTGAGGATCGCGCAACGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAAATAAGAAACCTTAAGGAAGAACATGAGCAGAAAATACAGGAAGTTGCTCTCTCAAAAACCAAGCAATTAGACAAGATTAAGGGGGAGCTGGAGGCAAAGATAGTGAACTTCGAACAGGAACTTCTTAGATCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAATGCTCAAACATGCTAATCAAATTAAGTGAAGAAAAGGCTCATGCCGAGGCTGAAATTGAGCTTCTTAAGGGAAACATAGAAGCATGTGAAAAGGAAATTAATTCACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTGAAAAAAATTGCCAAGTTAGAGGCCGAGTGCCAAAGATTACGTGGTCTTGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGCCTTGGCCGAGATTTTGGAGAAAGTCGATTAAGGAAGTCTCCTGTGAAGCCTGCTACCCCTAATTTGTCTCCATTACCTGATTTCTCCTTGGAGAATGTACAGAAATTCCAGAAGGACAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAGCGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAATCTCAGACAAGTAACCAGCTGAAATTATCTCCAAAATCCATCGTCCAGTTAACTCATGAAAGCATTTATAATCAAAATGCAAGCAGTGCACCAAGCTTGGTCTCCATGTCTGAAGATGGAAATGACGATGCAGCAAGTTGTGCTGAATCTTGGTCGACAGCAATAGTCTCTGGGCTATCCCAATTTCCTAGAGAAAAGTGCAATGAGGAATCAAACAAATCTGAAGTCACTAACAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTGTCAAATGATTCCAATGTAGATGCCACTGTTTCAAACAATAAGACAACAGACATTGTGACCGGTGATGTATCAGAAGTCTGTACTGGCAAAGAAGGTCTGTCTGAAAAAAATGGCAATTCAGATCCGCTGCCAAATCAAGTGTCTTCTGATCCTTTGATGTCAGCACCTGATTTTCAATCTGATCTTAGTGGCTTATTATTAACAGAACTTAGATCAAGAATATTACTGGTTTTTGAGTCCTTAGCTAAGGATGCTGACATAGGGAAGATTGTGGAGGATATTAAACATGTGCTTGAAGATTCGCATGACACTACCATCCACCACTCTGTGGATGCCCATCCTTCTGACGCTACATGTGATAGGAAGGATAATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGAAGTCATTTCATCCCAGCAACCCAAAGGATATGTGCAGATAACTTCAGATTTGGAAGCTGCAATTTCTCAGATTCATGACTTTGTATTGTTCCTTGGCAAGGAAGCAATGACATTCCATGACGATGTATCTTCTGATGGAAATGAAATGAGGCAAAAGATTGAGGAGTTCTCCATCACCTTTAATAAAGTATTATGCAACAATGCAAGTTTGCTACAGTTTGTTCTTGACCTGTCCTATGTTCTAGATAAAGCAAGTGAGTTCAGATTTAATGTCCTTGGCTACAGGGGCACAGAAGCTGAAAGTAGCAGTCCAGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTACATGACAATTCATCTGGAGAAAGATATCAAAATGGTTGTTCCCATATTATCAATCCATGTTCTAATCCCGAGGTTCCCGATGATGGAAATTTGGTCTCAGGCTATAAAGCAGATGCTGCATCACAGAAACTGTCAATAGAGGAGTTTGAAGAATTGAAACTAGAGAAAGAGAAAGTAGTGATTGATTTGTCAAATTGTACAGAAAATCTTGAAATGACAAAGTCTCAATTGCTAGACACGGAGCAACTTCTGGCTGAAGTTAAATCACAATTGGCTTCTGCTCTAAAATCAAAAAGCTTGGCTGAGACACAGCTAAAGTGTGTGGCAGAATCATACAACTCACTTGAAACACGTGCCCAGGTCTTGGAAACTGAGCTGAACCATCTGCAAATCAAGATAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAGGGCTCATGAAGTTGCTATGGCCAGGAGCAAGGAGCTAGAAGAGCAGTTACAAAGGATTGAGTGCTCGGCAGCTGATGATGACCACAAGACTTCGCATGAGAGAGATTTGACAGCTGCTGCTGAAAAGCTAGCCGAGTGTCAAGAAACCATACTTCTTCTGGGCAAGCAGTTAAATTCTCTACGTCCACAAACTGAGCCAAATGACTCATTGTACAGTAAGATAAATCCAAAAGATGAAGGATTCACAGAAGATGAACATACTACTAATCAAAATTTTCAAGAATTAGGTCAGTTGGAGATGGACAGTTCTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCCCCCTTGCATTTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCATTCCAGCCAGATCCCCAGTTCAGCATTCTAAATCAAAACCAAAACACCGACCTACCAAGTCAGCCTCTTGTTCAGTTTCTTCTGCCACTACACCTGAGAAACATGCACGGGGATTTAGTAGATTCTTTTCACCTAAAGGAAAATCCGGTCATTGA 3237 0.4106 MDRRWPWKKKSSEKSVIEKATTALDSSDASNNQDNKKKPNYVQISVESYSHLSGLEDQVKTYEEKVQTLEDEIKEMNEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIVNFEQELLRSAAENGALSRSLQECSNMLIKLSEEKAHAEAEIELLKGNIEACEKEINSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKPATPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQSQTSNQLKLSPKSIVQLTHESIYNQNASSAPSLVSMSEDGNDDAASCAESWSTAIVSGLSQFPREKCNEESNKSEVTNKLELMDDFLEVEKLARLSNDSNVDATVSNNKTTDIVTGDVSEVCTGKEGLSEKNGNSDPLPNQVSSDPLMSAPDFQSDLSGLLLTELRSRILLVFESLAKDADIGKIVEDIKHVLEDSHDTTIHHSVDAHPSDATCDRKDNPEDAGLNLEKEVISSQQPKGYVQITSDLEAAISQIHDFVLFLGKEAMTFHDDVSSDGNEMRQKIEEFSITFNKVLCNNASLLQFVLDLSYVLDKASEFRFNVLGYRGTEAESSSPDCIDKIALPENKLVHDNSSGERYQNGCSHIINPCSNPEVPDDGNLVSGYKADAASQKLSIEEFEELKLEKEKVVIDLSNCTENLEMTKSQLLDTEQLLAEVKSQLASALKSKSLAETQLKCVAESYNSLETRAQVLETELNHLQIKIESLENELQDEKRAHEVAMARSKELEEQLQRIECSAADDDHKTSHERDLTAAAEKLAECQETILLLGKQLNSLRPQTEPNDSLYSKINPKDEGFTEDEHTTNQNFQELGQLEMDSSTSAFVQRLSSESPLHFSNSLFSPSDSESTIPARSPVQHSKSKPKHRPTKSASCSVSSATTPEKHARGFSRFFSPKGKSGH 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00239 1078 MobiDBLite consensus disorder prediction 1 40 - -
Gma04g00239 1078 Coils Coil 204 287 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 956 981 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 1 16 - -
Gma04g00239 1078 Coils Coil 820 840 - -
Gma04g00239 1078 Pfam Filament-like plant protein, long coiled-coil 90 960 IPR008587 -
Gma04g00239 1078 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1078 - -
Gma04g00239 1078 Coils Coil 855 917 - -
Gma04g00239 1078 Coils Coil 136 196 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 17 40 - -
Gma04g00239 1078 SUPERFAMILY Tropomyosin 786 960 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 1017 1034 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 526 548 - -
Gma04g00239 1078 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1078 - -
Gma04g00239 1078 Coils Coil 347 374 - -
Gma04g00239 1078 Coils Coil 52 93 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 1046 1061 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 530 548 - -
Gma04g00239 1078 MobiDBLite consensus disorder prediction 1017 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00239 Gma-Chr4 2071536 2076056 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00239 04 2071536 2076056 Gma04g00239 04 2071536 2076056 ECH
Gma04g00239 04 2071536 2076056 Gma06g00220 06 1967430 1971994 GST
Gma17g02452 17 42544548 42552506 Gma04g00239 04 2071536 2076056 PCT
Gma14g02123 14 52396687 52403448 Gma04g00239 04 2071536 2076056 PCT
Gma04g00239 04 2071536 2076056 Gma17g02452 17 42544548 42552506 PCT
Gma04g00239 04 2071536 2076056 Gma14g02123 14 52396687 52403448 PCT