Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00086 ATGCAAAGGGCGACGCAACAAGGCATATCAAGTTCAAGGGGTTCAAAGTGCCATGACTGTGGGAACCAAGCCAAGAAGGAATGTTCATACTCAAGGTGCAGAACTTGCTGTAAAAACAAAGGCTTTCACTGCCAAACCCATATCAAGAGCACTTGGACTCCTGTGGATAATATTAGGAGACGCCATATTCCTCAAAATCACAACCCATATTCAGGATTAGAGTTGAAATTTCCGGGTGCTACAAATTCGATGGCTATATTTCGGTGCGTGAAGGTTCGTTCTATGGATGATGCGGTTTATGAAATAGCGTATCAAACATCTGTGAACATCGGAGGGCATGTATTTAATGGACTACTATATGATCAAGGTCCTGACCAAAGCTATAATAATAATTGTAAGGGTGAAAGTTCCACGAGCCTTGTTGATCAGCAGCAGAATAATCTGGGTTTTGTGAATATTAATAATGGTTCAATCCAGAGTAGAGATAGTAGTGGTGCAAGTGCAAGTGCAACTATGGCTTCTGTTGGTCCGGAAGAGACTCTTTTAACTCCATCACCATATCCGTTTTCCCTTGCTTCTTTCAGGTCCGGTATGCCATATTAA 603 0.4196 MQRATQQGISSSRGSKCHDCGNQAKKECSYSRCRTCCKNKGFHCQTHIKSTWTPVDNIRRRHIPQNHNPYSGLELKFPGATNSMAIFRCVKVRSMDDAVYEIAYQTSVNIGGHVFNGLLYDQGPDQSYNNNCKGESSTSLVDQQQNNLGFVNINNGSIQSRDSSGASASATMASVGPEETLLTPSPYPFSLASFRSGMPY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00086 200 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 76 124 IPR006511 -
Gma04g00086 200 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 6 195 IPR007818 GO:0003700|GO:0006355
Gma04g00086 200 MobiDBLite consensus disorder prediction 1 23 - -
Gma04g00086 200 PANTHER BNAC01G23660D PROTEIN 6 195 - -
Gma04g00086 200 MobiDBLite consensus disorder prediction 1 18 - -
Gma04g00086 200 Pfam Domain of unknown function (DUF702) 75 125 - -
Gma04g00086 200 Pfam Domain of unknown function (DUF702) 14 63 - -
Gma04g00086 200 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 16 55 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00086 Gma-Chr4 760256 761443 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gma04g00086 DUF702 1.7e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00086 04 760256 761443 Gma06g00081 06 737531 738502 GST