Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01180 ATGAGGGGTGAGAGGAGAAGGAAGTTGCATCTTAGCAAGATCTATTCATTTGCATGTGGGAAACAATCACTCAAGGAGGATCATTCACATATTGGAGGGAGAGGGTATTCTAGGGTGGTGTTTTGCAATGAGCCAGAGAGCTTTGAGGCCGGGATAAGGAGTTATGCTGATAATTATGTGAGCTCCACAAAGTATACTCTTGCTTCTTTCTTGCCTAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGGCCTTCACAAAACTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGATTATTATTGTTGGGGCAACTATGATCAAAGAGGGGATTGAAGATTTCCAAAGGAAAAAGCAGGATATTGAGGTGAATAGTAGAAGAGTTAAAGTGCATAAAGGGCATGGAACTTTTGAATATATTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCAGACCTCCTACTGCTTTCATCCAGTTATGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAATTTCTTCCTTACATGAGGACTTTCATTTCGGTGATTTTAAGGCTACAGTCAAATGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGAGCATGGAGTATGAAGAACAACAATATCCCCTTTCTCCTCTGCAACTTCTTCTCAGAGACTCTAAACTTCGTAACACAGACTACGTATTCGGTGCTGTCATCTTCACTGGTCATGACACGAAGGTCATTCAAAATTCCACTGATGCCCCTTCAAAGAGAAGCAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCTTGTTTTGTATTTTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTGAAGATGACTTGGACAATGGATTGATGAAAAGGTGGTACCTTAGACCAGATGATTCTACAATTTTCTTTGATCCTAAAAGAGCACCTGCTGCTGCTATATTTCATTTTTTGACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGATGCTGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAGACTGGAACTCTGACCTGCAACTCGATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTTGAGAGGGCAATGAATAGAAAAAATGGTTATCCTTTGATTGATGACACAAGGAGCTCTCCTGTCAGAAATGCTCCCATAAAAGGATTTAACTTTTCAGATGAAAGGATAATGAATGGAAATTGGGTTAATGAGCCTTATGCTAATGTTATCCAGAATTTTTTTCGCTTATTAGCAATCTGCCATACAGCCATTCCAGAAGTTGATGAAGACACAGGGAATATCTCATATGAAACTGAATCTCCAGATGAAGCAGCATTTGTGATAGCAGCTAGAGAAATTGGTTTTGAATTCTTTAAAAGGACTCAGACTAGTTTATCAATGTATGAATTGGATCCAGTTTCTGGTGACAAAACTGAAAGGATGTACAAACTTCTTAATATTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTCCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGAGAGTTTGAAGAGAAAACCATGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACCTTGATCCTAGCATTTCGTGAACTTGATGAAAACCAATACAAGGAGTTTGACAACAAAATTTCACAGGCGAAGAATTCGATTAGCGAAGATCGGGAAACACTGATTGAGGAAGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATATGGGTATTGACTGGGGATAAAATGGAGACTGCTATCAATATTGGGTTTTCTTGTAGTTTACTTAGACAAGGAATGAAGCAGATTATCATTCATTTGGAAACTCCAGATATTAAAACATTGGAGAAGGCTGGAGACAAGGGTGCTATTGTCAAGGCTTCAAGAGAAAGTATCCGCCATCAAATATCTGAAGCTGCTCAACAGCTTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTACTTATGCGCTAGAGGATACTATGAAGAACATGTTTCTAGACCTTGCAATTCGTTGTGCATCTGTTATTTGCTGCCGTTCCTCACCGAAGCAGAAGGCACTGGTCACTAGACTAGTCAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCTATTGCACAGTTTCGTTATTTAGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTCTTCTACAAAAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTACGCATCATTCTCTGGGCAACCTGCATACAATGACTGGTTTTTGTCACTCTATAATGTCTTCTTTTCGTCACTTCCCGTGATTGCTCTTGGGGTCTTTGACCAGGATGTGTCTTCTAGGTACTGTCAAAGGTTTCCTATGTTATATCAAGAAGGTGTGCAAAATGTCCTCTTTAGCTGGCGTCGAATTTTCAGCTGGATGCTTAATGGCTTTATTAGTGCCATAATAATTTTCTTCTTCTGCACAAAGGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACCGCTGGGAGGGACATACTCGGAGCAACGATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTTCTATAAGTTACTTCACCTTGATTCAACATATTTTCATCTGGGGCTCCATTGCTCTATGGTACCTTTTCCTCCTGGCATATGGAGCATTATCTCCCAGCTTTTCTGGAAATGCTTACAAAGTCTTCATTGAAACTCTTGCACCATCTCCTTCCTTTTGGATTGTGACATTGTTTGTTTCCATCTCAACACTTATCCCATACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCATGATATGGTACAATGGATAAGGTACGAGGGAAAGACAAATGACCCTGAATTCGTCGCTATGGTGCGGCAAGGATCATTGCGGCCAACAACCGTCGGTTCAACAGCTCGCTTAGCGGCTAAGGATAATGATTTTAGAGTCAGTGACACTAACCATAGATAG 3573 0.4033 MRGERRRKLHLSKIYSFACGKQSLKEDHSHIGGRGYSRVVFCNEPESFEAGIRSYADNYVSSTKYTLASFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVSAILPLIIIVGATMIKEGIEDFQRKKQDIEVNSRRVKVHKGHGTFEYIEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLKQGLEVISSLHEDFHFGDFKATVKCEDPNANLYSFVGSMEYEEQQYPLSPLQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDAPSKRSKVEKKMDRVIYFLFCILFLMAFVGSIFFGIATEDDLDNGLMKRWYLRPDDSTIFFDPKRAPAAAIFHFLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRKNGYPLIDDTRSSPVRNAPIKGFNFSDERIMNGNWVNEPYANVIQNFFRLLAICHTAIPEVDEDTGNISYETESPDEAAFVIAAREIGFEFFKRTQTSLSMYELDPVSGDKTERMYKLLNILEFNSSRKRMSVIVKDEEGRIFLLCKGADSVMFERLAKDGREFEEKTMEHVHEYADAGLRTLILAFRELDENQYKEFDNKISQAKNSISEDRETLIEEVSDKIERNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFSCSLLRQGMKQIIIHLETPDIKTLEKAGDKGAIVKASRESIRHQISEAAQQLTASRGTSQQAFALIIDGKSLTYALEDTMKNMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSSRYCQRFPMLYQEGVQNVLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVSISYFTLIQHIFIWGSIALWYLFLLAYGALSPSFSGNAYKVFIETLAPSPSFWIVTLFVSISTLIPYFSYSAIQMRFFPMYHDMVQWIRYEGKTNDPEFVAMVRQGSLRPTTVGSTARLAAKDNDFRVSDTNHR 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01180 1190 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Gma02g01180 1190 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Gma02g01180 1190 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Gma02g01180 1190 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Gma02g01180 1190 Coils Coil 649 669 - -
Gma02g01180 1190 Pfam Phospholipid-translocating P-type ATPase C-terminal 885 1135 IPR032630 -
Gma02g01180 1190 SFLD p-type atpase 406 908 IPR044492 -
Gma02g01180 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1135 IPR023298 -
Gma02g01180 1190 Gene3D - 532 691 IPR023299 GO:0000166
Gma02g01180 1190 Pfam Cation transport ATPase (P-type) 528 618 - -
Gma02g01180 1190 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1182 - -
Gma02g01180 1190 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1142 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma02g01180 1190 SFLD C1.7: P-type atpase like 406 908 - -
Gma02g01180 1190 CDD P-type_ATPase_APLT_Dnf-like 57 1006 - -
Gma02g01180 1190 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1182 - -
Gma02g01180 1190 SUPERFAMILY HAD-like 412 901 IPR036412 -
Gma02g01180 1190 Gene3D - 116 286 - -
Gma02g01180 1190 Gene3D - 692 897 IPR023214 -
Gma02g01180 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Gma02g01180 1190 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 939 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma02g01180 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 694 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01180 Gma-Chr2 13282188 13290086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01180 9 1186 Primary Pumps ATPases AT1G68710 72.488 0.0 1875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01180 02 13282188 13290086 Gma02g01180 02 13282188 13290086 ECH
Gma01g00911 01 29089865 29097336 Gma02g01180 02 13282188 13290086 GST