Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01050 ATGGAAGACAAAGACAGAGCAGCCTCCGATCCAGCTGAGTTCGCCGGCGACACGAGTTGGACACTCGCCACCGATGACTCCGACGGTGCGTACCTGTTCCCCGGCGACCGGGAGCGGAGCATACTCAGGGAATTCGGGTGGAACCTCGAACCGGACCAGCCAAACCGGATCGGCACCGACGACGGATCGTGGAGGCCGGTTCAGTCCTCTCTGACCGGTTCGATCGAACCGGCCGCCGCCATGTCGTCTAGGTCGAATAACCAATCGGTGTCGTCCAGCTCCAGCGAGGACCCGCCGGAGAAATCCACCGTCTCCGACGAGAAACCGCCTGAGATACCGAGTAAAGGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAGACTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCTTTCCCTAGGAGCTACTACCGGTGCACAAACAGCAAATGCACGGTGAAGAAGAGGGTTGAACGGTCTTCCGAGGACCCAACAATTGTGATTACCACATATGAAGGGCAACACTGTCATCACACAGTTGGATTTCCTCGAGGGGGAATCATTAGTCATGAAGCTGCATTTGCGGGCCAGTTGGCTCCAACAATGTCACAGTTTTATTATCCGATTCAATTACCCAGCAGAGAGAATGATGATAATAATAATAATACTTTGAGCACTATTTCTCAGCCATGCCAAGCACAGGATGAAACTGGAGAAGGATCAAGTGTTATGATGCCAGCTGATGGATCGTCACCGTCACAGCCTCCCACGGATGAAGGGTTGCTTGGAGATATTGTTCCCCCGGGAATGCGCATCAGATGA 882 0.5238 MEDKDRAASDPAEFAGDTSWTLATDDSDGAYLFPGDRERSILREFGWNLEPDQPNRIGTDDGSWRPVQSSLTGSIEPAAAMSSRSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKGKKKGQKRIRQPRFAFMTKTEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGQLAPTMSQFYYPIQLPSRENDDNNNNTLSTISQPCQAQDETGEGSSVMMPADGSSPSQPPTDEGLLGDIVPPGMRIR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01050 293 MobiDBLite consensus disorder prediction 62 99 - -
Gma02g01050 293 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01050 293 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01050 293 MobiDBLite consensus disorder prediction 233 293 - -
Gma02g01050 293 MobiDBLite consensus disorder prediction 45 128 - -
Gma02g01050 293 SUPERFAMILY WRKY DNA-binding domain 132 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g01050 293 Gene3D WRKY domain 127 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g01050 293 Pfam WRKY DNA -binding domain 141 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01050 293 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 214 IPR044810 GO:0003700
Gma02g01050 293 MobiDBLite consensus disorder prediction 100 117 - -
Gma02g01050 293 MobiDBLite consensus disorder prediction 233 277 - -
Gma02g01050 293 MobiDBLite consensus disorder prediction 1 31 - -
Gma02g01050 293 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 10 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01050 Gma-Chr2 11412483 11419700 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma02g01050 WRKY 1.8e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01050 02 11412483 11419700 Gma02g01050 02 11412483 11419700 ECH
Gma17g00330 17 2640244 2642569 Gma02g01050 02 11412483 11419700 PCT