Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01040 ATGTATGGGCCTGTGGCCACTTCAGATTCAGCCACATCCCGGGGTGGATTGCCAAATGACTGTGGGGACTCTGTTGTGACTTTGGATCAAGTTCCGAGGTGGATTGATGCTGAGCATTCCTTACAGTACGACAATGGAGATTCATCATTTTCCAGTTCATACTTCCCTGATCCCTTGGCATTCAAGTTGGGGACGGAGAGCGGTGGTGGTGTGTCAAGGTTTCCTGTTGACCATGAAGTTAATTCTAAGATATACTTGTGGAGGGGGAACCCCTGGAACCTTGAGGTTGATGCTGTGGTAAATTCGACGAATGAGGTTTTGGATGAAGCACTCAGCAGCCCTGGATTGCATGCTGCAGCTGGACCTGGTCTTGCAGAAGAATGTGCAACTTTGGGTGGATGTCGAACAGGTATGGCTAAAGTCACCAATGCCTACGACCTTCCTGCAAGGAAAGTTATCCATACTGTTGGCCCAAAGTATGCTTCGAAGTACCAAACTGCTGCAGAGAATGCTTTAAGCCATTGCTATCGTTCTTGCCTAGAACTTTTAATTGATCATGGGCTTAAAAGCATTGCCATGGGATGTATTTATACTGAGGCAAAGAACTATCCCCGTGAGCCAGCTGCGCATGTAGCTATAAGAACTGTGCGGCGGTTTCTTGAGAAGCAGAAAGACAATATAACAGCTGTTGTCTTTTGCACTACCAGCACAACTGATACTGAGATATATAAAAGGTTGCTTCCACTCTACTTCCCTCGGGATAAACAGGAGGAGGAGATGGCTTTGTCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGTGAGACTGTCATAGATGAGCGTAAAATCAGAATAAAGCCTTTGCCTCAAAAAAAGGTTTCAAAAGAATCAAAACCTGCTAAAGCTCCTGTTGATCTTCCTGTTAGTGATGTCGGTTCAGTTCGCAGGACTTCATCACATTTAGATACATATTTGGATCCTGCCTTCATGTCTTTGATTAAAGACCCTGATGAAAGACGTATGGAGCAGTGGGAGAAAACTGTTCAAGCACAAAGAGGCTGGAATTTTGCTAACGTGCTTGGATTTGGTGACTTAGGTGGACCTCCATTGTCTGCCGCTGAAGAATATTCTCTGCACTCTAGATATCTTTCAAAAGCAAAATCCTTAAATTTGTCTGAAATTGCAGAGATGAAAATTATCTATCGCGGAGGGGTAGACAGTGAGGGTCGTCCTGTCATGGTTGTTGTGGGGGCTCACTTTTTGCTTAGATGTCTTGATCTGGAGCGATTTGTGCTTTATGTGGTGAAGGAGTTCGAACTTATAATGCAGAAGCCTTACACTATTGTATACTTTCACTCTGCTTCATCTCTGCAGATGCAACCAGACCTAGGTTGGATGAGAAGATTACAACAAATACTTGGACGGAAGCACCAGCACAACCTGCATGCAATATATGTCCTCCACCCAACCCTTGGACTAAAATTGACAGTATTGGCACTTCAGTTGCTTGTTGACAATATGGTTTGGAAGAAAGTGGTATATGTTGATAGACTACTACAGCTCTTTAGATACATACCCCGTGAACAATTGACCATCCCAGATTTCGTCTTTCAGCATGACTTAGAAGTGAATGGAGGAAAAGGTCTCATTGTGGATCCAAGAACAAAATATGTTTATCACCGACCATGA 1689 0.4399 MYGPVATSDSATSRGGLPNDCGDSVVTLDQVPRWIDAEHSLQYDNGDSSFSSSYFPDPLAFKLGTESGGGVSRFPVDHEVNSKIYLWRGNPWNLEVDAVVNSTNEVLDEALSSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARKVIHTVGPKYASKYQTAAENALSHCYRSCLELLIDHGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNITAVVFCTTSTTDTEIYKRLLPLYFPRDKQEEEMALSKLPADVGDENGETVIDERKIRIKPLPQKKVSKESKPAKAPVDLPVSDVGSVRRTSSHLDTYLDPAFMSLIKDPDERRMEQWEKTVQAQRGWNFANVLGFGDLGGPPLSAAEEYSLHSRYLSKAKSLNLSEIAEMKIIYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFELIMQKPYTIVYFHSASSLQMQPDLGWMRRLQQILGRKHQHNLHAIYVLHPTLGLKLTVLALQLLVDNMVWKKVVYVDRLLQLFRYIPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01040 562 ProSiteProfiles Macro domain profile. 71 251 IPR002589 -
Gma02g01040 562 CDD SEC14 397 533 IPR001251 -
Gma02g01040 562 Gene3D Leucine Aminopeptidase, subunit E, domain 1 18 256 IPR043472 -
Gma02g01040 562 SMART sec14_4 390 539 IPR001251 -
Gma02g01040 562 Pfam Divergent CRAL/TRIO domain 409 540 IPR001251 -
Gma02g01040 562 SMART YBR022w_8 83 212 IPR002589 -
Gma02g01040 562 CDD Macro_GDAP2-like 82 250 IPR035793 -
Gma02g01040 562 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 542 - -
Gma02g01040 562 MobiDBLite consensus disorder prediction 1 23 - -
Gma02g01040 562 Gene3D - 392 543 IPR036865 -
Gma02g01040 562 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 542 - -
Gma02g01040 562 SUPERFAMILY CRAL/TRIO domain 391 530 IPR036865 -
Gma02g01040 562 Pfam Macro domain 100 212 IPR002589 -
Gma02g01040 562 SUPERFAMILY Macro domain-like 73 280 IPR043472 -
Gma02g01040 562 MobiDBLite consensus disorder prediction 1 17 - -
Gma02g01040 562 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 387 536 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01040 Gma-Chr2 11286429 11295255 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01040 02 11286429 11295255 Gma02g01040 02 11286429 11295255 ECH
Gma01g00509 01 7270418 7278786 Gma02g01040 02 11286429 11295255 GST