Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01037 ATGACATTGTACATGCCGCTGTTCAGGTCATGTTCTACCTTAAGGTACCTCACCCAACTCCACGCCCACCTCGTCGTCACTGGCCTCCACAGCGACCCACTTGCCTCCACCAAGCTCCTCGAGTCCTACGCCCAAATGGGTTCTCTCCAATCATCAAGACTCGTTTTTGAAACCCACCCATCATCCGATTCCTTCATGTTCGGCGTCCTCGTCAAGTGTTACCTCTGGCACTACTTGTTTGACCAAGTGGTTTTGCTTTACCACCACCACACTCAAAATGGTTCACGCCTCACCCAAAACTGCACCTTCCTCTACCCTTCTGTTCTGAAAGCTGTTTCTGTGGTTTCTGACTTGGTTGCTGGCAGGAAATTGCATGGAAGGATAGTTAGGTGTTTGATGAAATGCGTGAGGGATTTGGTTTCATGGAGTTCGGTTGTCACGTGTTATGTTGAGAATGGACGACCGGGAGAAGGGTTGGAGATGTTGCCTTGGATGGTTTCTGAGGGGATTGTACCAGACTCGGTTACGATGCTTGGCATAGCTGAGGCAGGTGATAAAGTTGGTTGTTTGAGGGTGGTGAGGTCAGTGCATGGATATGTGATCAGGAAAGAGATGGCTGGTGATGCAAGTGTGAGGAACTCCCTTATTGTTATGTACAGTCAGTGTGGTTACTTGCGTGGAGCAAAAGGGGTGTTTGAAAGTGTTGCTGATCAAAGTACTGCTTGTTGGACTTCAATGATTTCGTCTTGTAATCAAAACGGACGCTTTGAGGAGGCTATTGATGCTTTTAAGAAAATGCAGGAATCGGAAGTGGAAGTTAATGAAGTGACGATGATTAGTGTTCTTTGTTGCTGTGCTAGGTTAGGCTGCTTGAAAGAGGGGAAGTCAGTTCATTGCTTTATTTTGAGGAGAGAAATGGATGGTGCTGATCTTGATCTAGGGCCTGCGCTCATGCATTTCTATTCTGCGTGTTGGAAAATAAGCAGTTGTGAAAAGATTCTTTGTTTAATTGGAAACAGCACTGTTGTATCATGGAACACACTCATACCAATTTATGCGCTGGAAGGTTTGAACGAGGAGGCCATGGTTCTCTTTGCATGTATGTTGGAAAAGGGGCTAATGCTTGATTCATTTAGTCTTTGCATGTATGCTGGTTCAATACGATTTGGACAGCAGATACACGGCCATGTCACGAAAAGAGGCTTCGTGGATGAATTTGTTCAGAACTCCTTGATGGATATGTATTCAAAATGTGGTTTTGTGGATTTGGCATACACAATTTTTGAAAAGATGAAGGAGAAAAGCATGGTGACATGGAACTGTATGATTTGTGGGTTTTCTCAGAATGGCATTTCAGTAGAAGCACTCAAGTTATTTGATGAGAAGGATCTTTACATTGATACATCTCTGGTTGACATGTATGCCAAATGTGGAGACCTTAAAACGGCTCAAGGTGTTTTCAATAGCAAGTCGAAGAAAAGTGTGGTGTCATGGAATGCCATGATTGCTGCATATGGCATACATGGTCAAATAACTTTTGCCACCACCCTCTTTAGTAAAATGGTAGAGTCACATATTAAACCAAACGAGCAAGTCGTTGCCATTCTCCTTCAAATGACAACTACAAACGAACTGCCATTGTCTGCTGACACGTTGTCACTGGCAATGCAAAGGGCGGGAAAAAGGAACAACAGGGCTTCTCTCTCCATGATAAAAAATGGTAACAAGAAATCAATGAATGAGAGATATGCCCCTTGTGGTTTGCGAGCCAATTGGGGTGATGGGAAACCAACAAATCTCTTTCAATAG 1809 0.4406 MTLYMPLFRSCSTLRYLTQLHAHLVVTGLHSDPLASTKLLESYAQMGSLQSSRLVFETHPSSDSFMFGVLVKCYLWHYLFDQVVLLYHHHTQNGSRLTQNCTFLYPSVLKAVSVVSDLVAGRKLHGRIVRCLMKCVRDLVSWSSVVTCYVENGRPGEGLEMLPWMVSEGIVPDSVTMLGIAEAGDKVGCLRVVRSVHGYVIRKEMAGDASVRNSLIVMYSQCGYLRGAKGVFESVADQSTACWTSMISSCNQNGRFEEAIDAFKKMQESEVEVNEVTMISVLCCCARLGCLKEGKSVHCFILRREMDGADLDLGPALMHFYSACWKISSCEKILCLIGNSTVVSWNTLIPIYALEGLNEEAMVLFACMLEKGLMLDSFSLCMYAGSIRFGQQIHGHVTKRGFVDEFVQNSLMDMYSKCGFVDLAYTIFEKMKEKSMVTWNCMICGFSQNGISVEALKLFDEKDLYIDTSLVDMYAKCGDLKTAQGVFNSKSKKSVVSWNAMIAAYGIHGQITFATTLFSKMVESHIKPNEQVVAILLQMTTTNELPLSADTLSLAMQRAGKRNNRASLSMIKNGNKKSMNERYAPCGLRANWGDGKPTNLFQ 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01037 602 Pfam PPR repeat 468 488 IPR002885 -
Gma02g01037 602 Pfam PPR repeat 343 373 IPR002885 -
Gma02g01037 602 Pfam PPR repeat 140 168 IPR002885 -
Gma02g01037 602 Pfam PPR repeat 409 434 IPR002885 -
Gma02g01037 602 Pfam PPR repeat 437 461 IPR002885 -
Gma02g01037 602 Pfam PPR repeat 213 233 IPR002885 -
Gma02g01037 602 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 461 533 - -
Gma02g01037 602 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 12 131 - -
Gma02g01037 602 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 135 247 - -
Gma02g01037 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 404 438 IPR002885 -
Gma02g01037 602 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 461 533 - -
Gma02g01037 602 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 135 247 - -
Gma02g01037 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 138 172 IPR002885 -
Gma02g01037 602 Gene3D Tetratricopeptide repeat domain 295 389 IPR011990 GO:0005515
Gma02g01037 602 Gene3D Tetratricopeptide repeat domain 182 294 IPR011990 GO:0005515
Gma02g01037 602 Gene3D Tetratricopeptide repeat domain 398 462 IPR011990 GO:0005515
Gma02g01037 602 Pfam PPR repeat family 240 286 IPR002885 -
Gma02g01037 602 Pfam PPR repeat family 493 538 IPR002885 -
Gma02g01037 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 341 375 IPR002885 -
Gma02g01037 602 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 12 131 - -
Gma02g01037 602 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 372 461 - -
Gma02g01037 602 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 231 372 - -
Gma02g01037 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Gma02g01037 602 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 372 461 - -
Gma02g01037 602 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 231 372 - -
Gma02g01037 602 TIGRFAM PPR: pentatricopeptide repeat domain 242 275 IPR002885 -
Gma02g01037 602 TIGRFAM PPR: pentatricopeptide repeat domain 437 461 IPR002885 -
Gma02g01037 602 TIGRFAM PPR: pentatricopeptide repeat domain 407 436 IPR002885 -
Gma02g01037 602 TIGRFAM PPR: pentatricopeptide repeat domain 496 530 IPR002885 -
Gma02g01037 602 TIGRFAM PPR: pentatricopeptide repeat domain 140 174 IPR002885 -
Gma02g01037 602 Gene3D Tetratricopeptide repeat domain 80 181 IPR011990 GO:0005515
Gma02g01037 602 Gene3D Tetratricopeptide repeat domain 463 591 IPR011990 GO:0005515
Gma02g01037 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 239 273 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01037 Gma-Chr2 11266137 11272728 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00506 01 7227897 7230383 Gma02g01037 02 11266137 11272728 GST