Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00994 ATGTCTGAGGTTGTTACTAAAGACTCTGCCATAAAGCTGTTTGGTAGAACAATTTCTCTGTCACGcaacaacaacaacaacaacaacaacaacGAGGTTTCTTCTTCTGCTAATGGTTTTTCTTCTGATGAACCTGCTCCTCCTGAAGATTCATCTTCATCTTTTCCACGTGAAGTGAGCTCCACAACGGAACATGAAGCTGGGAGGGATAAGGAACCATCAAGGAAAGAACTCACCTCGGCACAAGAAGAAGACGAGGAGGCCTCACATCAAACCATAGAGGAACCAAAATCTCCAACATCATCTTCATGCAATCTTGAGAACCCCAAGACCCCTTCAACAGAAAGAGAAACTTCCATACTGAAATCTTCCAAAAACGGAGACCAAAGCGACGCAACAACAACAAGTCCATCACAGGACAAAACTCTAAAGAAACCAGACAAGGTGCTTCCATGCCCACGCTGCAATAGCATGGACACAAAGTTCTGCTACTACAACAACTACAACGTGAACCAACCGCGCCATTTCTGCAAGAACTGCCAGAGATATTGGACCGCCGGAGGAACCATGAGGAACGTGCCGGTGGGTGCAGGCCGCCGTAAGAACAAGAACACTCCCTCTTCTCTGTCGCATTTTCGCCAGATCATGGTTCCTGAGGGCCTTCAGAACGGATCACTGCACGGTGCTGCTGTTTTGACCTTTGGATCAGACCCTCCCCTTTGTGACTCCATGGCTTCTGTGTTGAGCCTTGCTGAGAAAACAACACAAAATGgttcttcttcttctccttgGCCTTATCCATCCAATAACCCTATAATGACTCCTTCAGCTTTTTGCCACCCTGTGCCATTCTACCCTACACAAGCTTTCTGGGGTTCCATGCCACCACCCTCTTGGAGTGTAAACTACCAATCTGCCCCTGGTTCTGGTCCAAATTCACCCACCTTAGGGAAACACTCAAGAGATGGTGATATCTTGTTTAGCACAGACATGGCAGCAAACAACAACAACAACACAGTGTTGATCCCAAAGACACTGAGAATTGATGACCCAACTGAAGCTGCTAAGAGCTCAATATGGTCAACACTAGGGATCAAGAATGAGAAGGGAAACTCCCTCAATGGAGGAGGGCTTTTCAAGGCATTTGCATCAAAGGGTAACAGTGATGACAAGAAGAACCACGCGGTGATGGTTGAAGCATCCCCATCACCAGTGTTGCAAGCCAACCCTGCAGCTTTGTCAAGGTCCCTTGTCTTCCATGAGAGGACATAA 1272 0.4568 MSEVVTKDSAIKLFGRTISLSRNNNNNNNNNEVSSSANGFSSDEPAPPEDSSSSFPREVSSTTEHEAGRDKEPSRKELTSAQEEDEEASHQTIEEPKSPTSSSCNLENPKTPSTERETSILKSSKNGDQSDATTTSPSQDKTLKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNTPSSLSHFRQIMVPEGLQNGSLHGAAVLTFGSDPPLCDSMASVLSLAEKTTQNGSSSSPWPYPSNNPIMTPSAFCHPVPFYPTQAFWGSMPPPSWSVNYQSAPGSGPNSPTLGKHSRDGDILFSTDMAANNNNNTVLIPKTLRIDDPTEAAKSSIWSTLGIKNEKGNSLNGGGLFKAFASKGNSDDKKNHAVMVEASPSPVLQANPAALSRSLVFHERT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00994 423 ProSitePatterns Zinc finger Dof-type signature. 152 188 IPR003851 GO:0003677|GO:0006355
Gma02g00994 423 PANTHER CYCLIC DOF FACTOR 2 6 258 IPR045174 GO:0003700|GO:0006355
Gma02g00994 423 MobiDBLite consensus disorder prediction 62 93 - -
Gma02g00994 423 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 6 258 - -
Gma02g00994 423 PANTHER CYCLIC DOF FACTOR 2 260 423 IPR045174 GO:0003700|GO:0006355
Gma02g00994 423 ProSiteProfiles Zinc finger Dof-type profile. 150 204 IPR003851 GO:0003677|GO:0006355
Gma02g00994 423 MobiDBLite consensus disorder prediction 94 140 - -
Gma02g00994 423 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 260 423 - -
Gma02g00994 423 MobiDBLite consensus disorder prediction 1 150 - -
Gma02g00994 423 MobiDBLite consensus disorder prediction 16 61 - -
Gma02g00994 423 Pfam Dof domain, zinc finger 147 204 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00994 Gma-Chr2 10614705 10617848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00994 8 421 C2C2-Dof Transcription Factor Family AT5G39660 39.873 2.28e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma02g00994 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00994 - - gmx:100788246 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00454 01 5866252 5870143 Gma02g00994 02 10614705 10617848 GST
Gma02g00994 02 10614705 10617848 Gma17g00950 17 8101698 8105003 PCT
Gma02g00994 02 10614705 10617848 Gma05g00253 05 2303134 2305993 PCT