Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00910 ATGGCTGGAACATCATGGTTGGTGGACAAAAGTAGAATTGCAACCAAAATAAAATGTGCATCAGGAGCTTGTGATCATGGAAAGGTTATATGGAAAAGCAATCCTACCAAGGCTTGCCCAAATTGTCAACATGCTATTGACAACGGTGATGTAGCACAAGAGTGGCCTGGCTTGCCAAAAGGTGTCAAATTTGATCCATCTGATCAGGAGATCATTTGGCACTTGCTTGCAAAAGTTGGGGTAGGAGATTCAAAATCTCATCCCTTCATTGATGAATTTATTACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCTCAAAATTTACCTGGTGTTAGGCAAGATGGAAGTGCTTCCCACTTCTTCCATAGAGCAATCAAGGCTTACAACACGGGCACCCGAAAGCGCCGAAAAATACTAGGGCAAGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAACCAGTTGTCTTGAGTGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATGTGAGCAATGTAAGAGGAGGAAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCACCTAGGAACAGAAGAGGATGAAAAGGATGGGGAGTACATTATCTCTAAAGTGTTTTACCAGCAGCAGCAAGTCAAATTGGGTGATAAAAATGACCAAGATGTTCCTGAAGCCTCTGAAATCACTGGACCCCACCCAGGTCTGTCTGTGGGAGAAGAAGGGACTATTGAGAAAGTGGATCCAGTCACTCCGAAATTGGTGACTCCTGAGCCTCCTTGTAATGGAAGGTGGTGTGCAGATCTAGACCTAGGACAAGAAACACATAATGTTCCTCAGCCTCCTCGGATGGATTGTTTAGATGAAATTCAAGCTGATTGCCAAGTACTTGCAAATGAATCATCCATGGTAGAAACTCAACACAATGAAGGGATGGATGATAAAGAAAATAATGCGGAGGATGGCCAAAAATGGTGGGACAGTGAGTCACAGAATCTGTTGGATTCACAACAACTGGTCGAGGCACTGTCGCTGTGTGACGATCTACTCCAAAGCCAGTCTCCCAGTAGAGATGGAAAACATGAAGATCACAAGAACCAACCCGGTCTTTCTGTTTATGCTCAGTTAGGACCAGAACATCTGAAGAAGGATATTGAAGAGTGTCAAAATCTTGCCCTTAATCCTGCAAATATAGAGAACGATACACCTTCAGAGTTTCAACTAAGTCAGCTGGAATTTGGTTCACAGGACAGCTTTATTTCCTGGGGCTACAGCAAGGCAGTGAACTAA 1311 0.431 MAGTSWLVDKSRIATKIKCASGACDHGKVIWKSNPTKACPNCQHAIDNGDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGVGDSKSHPFIDEFITTLEVDDGICYTHPQNLPGVRQDGSASHFFHRAIKAYNTGTRKRRKILGQDFGDVRWHKTGRTKPVVLSGVQKGCKKIMVLYVSNVRGGKAEKTNWVMHQYHLGTEEDEKDGEYIISKVFYQQQQVKLGDKNDQDVPEASEITGPHPGLSVGEEGTIEKVDPVTPKLVTPEPPCNGRWCADLDLGQETHNVPQPPRMDCLDEIQADCQVLANESSMVETQHNEGMDDKENNAEDGQKWWDSESQNLLDSQQLVEALSLCDDLLQSQSPSRDGKHEDHKNQPGLSVYAQLGPEHLKKDIEECQNLALNPANIENDTPSEFQLSQLEFGSQDSFISWGYSKAVN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00910 436 MobiDBLite consensus disorder prediction 358 377 - -
Gma02g00910 436 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Gma02g00910 436 MobiDBLite consensus disorder prediction 228 247 - -
Gma02g00910 436 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 430 - -
Gma02g00910 436 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Gma02g00910 436 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Gma02g00910 436 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 430 IPR044799 GO:0003700
Gma02g00910 436 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00910 Gma-Chr2 9624084 9630267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00910 30 223 NAC Transcription Factor Family AT1G28470 56.000 4.00e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g00910 NAM 6.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00910 02 9624084 9630267 Gma02g00910 02 9624084 9630267 ECH
Gma01g00863 01 27727356 27732103 Gma02g00910 02 9624084 9630267 GST