Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00908 ATGCCACCGACACTCTCACTCTCACTAGTGTTGGTGGTGCTGTTTTTCGCCGCCGTGGACGCGCATTTTCCGGCGACCGGCGAGCTTCCAACGTTCCGCGAGGCGCCGGCATTCCGCAACGGAAGAGAATGCCGCAACCGCCCGCGAAGCGACTCCGTGATCCACATCGCGATGACGCTTGACGCGACCTACCTCCGAGGCTCCGTCGCCGGAGTGTTCTCCGTGCTGCAGCACGCGTCGTGTCCGGAGAACGTCGTGTTCCACTTCATAGCCACCACGCACCGCCGGACGGAGCTCCGTCGCATCATCACCGCGACGTTCCCGTACCTCTCCTTCCACCTCTACCACTTCGATGCGAACCTCGTCCGCGGCAAGATCTCGTACTCGATCCGGCGCGCACTGGATCAACCGCTAAACTACGCGCGCATGTACCTCGCAGATCTTCTTCCGGCGACCGTGCGGCGAATCATTTACTTCGACTCCGACCTCATCGTCGTTGATGACGTGGCGAAGCTCTGGAGCATCGATCTCCACGCGCGCGTGCTTGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAACTACTTCACGCACCGCTTCTGGTCAAACCCTAGCTACGCGGCGTCATTTAAGAGACGCGACGCGTGCTACTTCAACACTGGCGTAATGGTGATCGATCTGTGGAAATGGCGCGAGGGAAGATACACGGAGAAGCTTGAGACGTGGATGCGGATCCAGAAGCGGAACCGGATCTATGAACTAGGTTCGTTGCCACCGTTTCTGCTTGTTTTCGCCGGTGACGTGGAGCGCGTAGAGCACCGGTGGAACCAGCACGGCCTGGGCGGCGATAACCTCGAAGGTCTCTGCCGAGATCTGCATCCCGGTCCGGTGAGTTTACTTCACTGGAGCGGCAAGGGGAAGCCGTGGCTGCGAATCGATTCCAAGAAGCCGTGTCCGTTGGATAGTCTTTGGGCTCCGTACGATCTCTTTCGCCACTCGCCGTCACTGTTCTCCGATTCGTAG 1023 0.5992 MPPTLSLSLVLVVLFFAAVDAHFPATGELPTFREAPAFRNGRECRNRPRSDSVIHIAMTLDATYLRGSVAGVFSVLQHASCPENVVFHFIATTHRRTELRRIITATFPYLSFHLYHFDANLVRGKISYSIRRALDQPLNYARMYLADLLPATVRRIIYFDSDLIVVDDVAKLWSIDLHARVLGAPEYCHANFTNYFTHRFWSNPSYAASFKRRDACYFNTGVMVIDLWKWREGRYTEKLETWMRIQKRNRIYELGSLPPFLLVFAGDVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHSPSLFSDS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00908 340 Pfam Glycosyl transferase family 8 55 312 IPR002495 GO:0016757
Gma02g00908 340 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 11 339 - -
Gma02g00908 340 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 339 - -
Gma02g00908 340 SUPERFAMILY Nucleotide-diphospho-sugar transferases 54 332 IPR029044 -
Gma02g00908 340 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 55 321 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00908 Gma-Chr2 9583271 9584934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00908 28 340 Glycosyltransferase AT1G13250 79.375 0.0 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00908 02 9583271 9584934 Gma02g00908 02 9583271 9584934 ECH
Gma01g00860 01 27641240 27642256 Gma02g00908 02 9583271 9584934 GST