Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00896 ATGCAACCCTTGAAAATGGGGTTCCGTGAGTACATCGAAGCTTTGGAGGAAGAAAGGAAAAAAATCCAAGTTTTCCCTAAAGAGCTTCCTTTGTCATTAGAGCTTGTCACACAAGCAATTGAGGCGTGTAGACAGCAATTGTGTGGAACGGTTGCGGAGTACAATTTGAATGCCCAATCGGAGTGTTCGGAGCAGACATCAACGGATGGACCTGTTTTTGAGGAGTTCATTATTCCTATAAAGAAAAAGGCATCTCAAGCATCTGTTGAAGAAGATGATGATGAAGAACATTCTCATAAACACACAAAAACCACCACTGATAAAAAGAAATCAGATTGGCTCAGATCCGTTCAGTTGTGGAATCCCAATCCACCTCCTACCAAAGAGGATGTTGTGCCTAGGAAAACTAATGTTGTGGAAGTGAAGAGAAACGGTGGTGGAGCTTTTCAACCATTCCAAAGAGAGGAAAAAAGTGGTGTTTCAAAGGCTAATAATAATAATGAAGCATCGGCAATTGGTAAAGCGCCCTCTTCACCACCAGTGCCTGCTACAAGTTATACAGGGCCAGTGAGAGTAGACAGCAAAAAAGAGGAGAAAGGAGACGCTCAGAGAAAGCAACGCAGGTGCTGGTCACAAGAATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTCTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTTCACACTAGAAGAAGCCCCATAATCCACAACAGTGCAAGTTCACAAGCAGGCTCTTTATTTCTTGTGGGGAACATTTTTGTGCAGCCACCAGAATATGCTACCTCATCAGCATCTGGAGGGGAATTGACCACAGCTACCCCTGCTGCTCCAACTGGAATATATGCACCTGTGGCTGCACACCTTCCAGCTGGCACCCACACATCACCAATTATGAAGCATTCACATTCACCTTCTGAGGAAAAGAATAATCATAGTGTTCATTCAAACTCACCGGCCTCATCATCCTCCACACACACCATCACAACTTCACCACCTGCCTAA 1098 0.4426 MQPLKMGFREYIEALEEERKKIQVFPKELPLSLELVTQAIEACRQQLCGTVAEYNLNAQSECSEQTSTDGPVFEEFIIPIKKKASQASVEEDDDEEHSHKHTKTTTDKKKSDWLRSVQLWNPNPPPTKEDVVPRKTNVVEVKRNGGGAFQPFQREEKSGVSKANNNNEASAIGKAPSSPPVPATSYTGPVRVDSKKEEKGDAQRKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIIHNSASSQAGSLFLVGNIFVQPPEYATSSASGGELTTATPAAPTGIYAPVAAHLPAGTHTSPIMKHSHSPSEEKNNHSVHSNSPASSSSTHTITTSPPA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00896 365 MobiDBLite consensus disorder prediction 85 114 - -
Gma02g00896 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 361 IPR044787 GO:0003700|GO:0006355
Gma02g00896 365 MobiDBLite consensus disorder prediction 84 208 - -
Gma02g00896 365 MobiDBLite consensus disorder prediction 191 208 - -
Gma02g00896 365 MobiDBLite consensus disorder prediction 323 365 - -
Gma02g00896 365 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 361 - -
Gma02g00896 365 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 260 IPR006447 GO:0003677
Gma02g00896 365 MobiDBLite consensus disorder prediction 342 365 - -
Gma02g00896 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 262 IPR017930 -
Gma02g00896 365 MobiDBLite consensus disorder prediction 157 173 - -
Gma02g00896 365 SUPERFAMILY Homeodomain-like 203 263 IPR009057 -
Gma02g00896 365 Pfam Myb-like DNA-binding domain 207 256 IPR001005 -
Gma02g00896 365 Gene3D - 204 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00896 Gma-Chr2 9310382 9312685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00896 10 318 G2-like Transcription Factor Family AT1G68670 47.463 1.29e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma02g00896 Myb_DNA-binding 2.2e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00896 02 9310382 9312685 Gma02g00896 02 9310382 9312685 ECH
Gma01g00847 01 26864544 26866903 Gma02g00896 02 9310382 9312685 GST