Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00887 ATGAAAAATATGCAAGGCTTCAAGACAGCACAACAGCCAAGTTCACAACAACAACTCTATTGTCACTCTTCCTTCTTGCTTAGGGGAAACGACCCTAACCGAAACACAACGCGATTCTCTGATCTTGGGGAGCTTCACCATTCCTCTAGTGTTTTTCATCATGAAGATGCTGCGGATTTAAGCTCAAGTTCTATGTTTAGTGTGAAGTCGAACAATGTTGTTGGTGGTAGTAACATACAGTATGGGACATTGAACACATTGAGCACGAATGTTGGGTCTGCGGAGATTGGTACAAGTGTGCGAGGGTGCATGGATACAGGGCAGCAACTGATGTATCACAAAGGAGTGACTACGGCAGCCTTGCCTTTGGGGAATGGTCAAGTTGAGAATTGGGATGATTCAGGCCTAGCTGATAATAGCCAACAGACTGATCATACCTCCACAGATATTGACACTGATGATATAATCCAATGCAATAGAGTCAAGAATGGGACACGAATGGTTGTGCACTCCAAGGATGCGACAAAGGTGAAACCTGGAGATCAAAAGACCCTTCGTAGACTGGCTCAGAATCGGGAGGCTGCAAGGAAAAGTCGGTTAAGGAAAAAGGCATATGTACAACAGTTGGAGAGCAGCCGAGTCAAGCTTGTGCATTTAGAGCAAGAACTTCAACGAGCACGTCAGCAGGGTATATTTATTGCGACTCCAGGGGATCAAGGTCATTTGGCTGTTGGAAATGGTGCCTTAGCATTTGACATAGATTATGCTCACTGGGTTGATGAGCATCAACGTCTTCTCAACGATCTAAGAACAGCTATAAATTCTCAAATGAGTGATAGTGACTTACATATTCTGGTTGATAGTGTTATGGCACATTACAATGAATTATTTAGGCTAAAGAGCATTGGTGCAAAGGCTGATGTATTACACATACATAATGGGATGTGGAAGACACCTGTGGAAAGATGTTTTATGTGGCTTGGTGGATTACGTTCGTCTGAACTTCTCAAGATCATCAAGAACCACCTTGAGCCATTAACAGATCAGCAGTTGATGGGAATTTGTAATCTACAACAGTCTTCCCAGCAGGCTGAGGATGCTTTAAATCAAGGCATGGAAGCATTGCAACAATCTCTTGTAGAAATACTTTCCTCTACTTCCCTAGGACCCAATGGTAGTGGAAATGTTGCTGATTACATGGGTCAAATGGCTCTTGCAATGGGCAAGCTTGCTGTTTTGGGGAGTTTTCTTCACAAGGCCGACCTCTTGAAGCAAGAAACTCTTGAACAGCTGCAACGAATCTTGACAACGCGCCAAACCGCTCGAGCCCTCCTTGTCCAAAACGATTACATTTCAAGACTAAGAGCGCTTAGTTCGTTATGGTTGGCGCGCCCTAGAGAGTAG 1404 0.4416 MKNMQGFKTAQQPSSQQQLYCHSSFLLRGNDPNRNTTRFSDLGELHHSSSVFHHEDAADLSSSSMFSVKSNNVVGGSNIQYGTLNTLSTNVGSAEIGTSVRGCMDTGQQLMYHKGVTTAALPLGNGQVENWDDSGLADNSQQTDHTSTDIDTDDIIQCNRVKNGTRMVVHSKDATKVKPGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVHLEQELQRARQQGIFIATPGDQGHLAVGNGALAFDIDYAHWVDEHQRLLNDLRTAINSQMSDSDLHILVDSVMAHYNELFRLKSIGAKADVLHIHNGMWKTPVERCFMWLGGLRSSELLKIIKNHLEPLTDQQLMGICNLQQSSQQAEDALNQGMEALQQSLVEILSSTSLGPNGSGNVADYMGQMALAMGKLAVLGSFLHKADLLKQETLEQLQRILTTRQTARALLVQNDYISRLRALSSLWLARPRE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00887 467 CDD bZIP_HBP1b-like 183 235 - -
Gma02g00887 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Gma02g00887 467 Pfam Seed dormancy control 266 340 IPR025422 GO:0006351|GO:0043565
Gma02g00887 467 Pfam bZIP transcription factor 183 219 IPR004827 GO:0003700|GO:0006355
Gma02g00887 467 Gene3D - 182 231 - -
Gma02g00887 467 ProSiteProfiles DOG1 domain profile. 248 464 IPR025422 GO:0006351|GO:0043565
Gma02g00887 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Gma02g00887 467 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Gma02g00887 467 SMART brlzneu 179 248 IPR004827 GO:0003700|GO:0006355
Gma02g00887 467 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 43 467 - -
Gma02g00887 467 PANTHER TRANSCRIPTION FACTOR TGA9 43 467 - -
Gma02g00887 467 Coils Coil 202 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00887 Gma-Chr2 8950398 8956762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00887 19 467 bZIP Transcription Factor Family AT1G68640 57.826 7.66e-163 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma02g00887 DOG1 8e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00887 02 8950398 8956762 Gma02g00887 02 8950398 8956762 ECH
Gma01g00822 01 25684310 25690671 Gma02g00887 02 8950398 8956762 GST