Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00833 ATGGTCTTCCCGTCCCTTCCAATCTATCTAGATCCACCCAACTGGTCACAACAGCAGCCTAATCAGCAAGCAGGAATTGGCACTAATAATCCACAGATTCCACCACCTCTGCAGCCGTCACCACCTTCATCGGTGACGACAGGTATCGGAGGTGGTGACTATATTCAAGGCTCTATCAGACCAGGATCAATGGCTGATAGAGCCAGGATGGCCAAGATACACCAACCCGATGCAGCACTCAAATGTCCACGATGTGAATCCACAAACACCAAGTTTTGCTACTACAACAACTACAGCCTCTCACAGCCTCGCCACTTTTGCAAGACTTGTCGTCGTTACTGGACCAGAGGAGGTGCACTCAGGAGCGTGCCAGTTGGAGGTGGCTGCAGAAGGAACAAAAGAAACAAAGGGAACAGTGCTAGATCAAAGTCTCCTATGAAACCTTCAGCAAGTGCTAATTCTTCTTCTAGTGGCTGCACCCCTGATCATGTGATGATGACTCATTTGCCAACTCCAATAACACCAACTCAATTCCCATTCTTGGCCTCTTTACATCATTATAATGGCGACTACGTTTCTGGGGGCATTGGATCTCATTTTGGGGCGATCACAACACCTTTGGTGGCTAGAAATAATGGCAACAACACTAGTGATGTTGAGTTTCAAATTGGTACTAGTTCAGCTTCATCACTTGGTAATATTAGTGGAGGGGCTATGTTGTCAAATAATGGCCTTGGTGATCAGCAATGGAGGTTTAACAATCTGCAACAAGTTCAACATCAGTTCCCTTTCTTGAGTACTAATTTTGAGCCACAAATTGGGGTGTTTCAGTTTGGTGGTGGAGAAAATAACAATGCTGAACCGCCAAGTTATGCAAAGGGTCATGGAGGCCGGTTTAATAATATTCGTTCTAAAATGGATTCTATTAATTCTAGTGTAAGTGGAATAGTGCCTCAGCTTAATACAATAAAGCTGGAAGAGAATCAAGGTTTGAGTTTGTCAAAAAATCTCTTGATGACTAGTTCGGGAAATGGTGTACTTTGGAATAATGGAAGTAGTGGCAATGCATGGAGTGAGGTTCCTAGTTTCATTCCTTCACCTAACCACTTGTTGTGA 1116 0.4418 MVFPSLPIYLDPPNWSQQQPNQQAGIGTNNPQIPPPLQPSPPSSVTTGIGGGDYIQGSIRPGSMADRARMAKIHQPDAALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRNKGNSARSKSPMKPSASANSSSSGCTPDHVMMTHLPTPITPTQFPFLASLHHYNGDYVSGGIGSHFGAITTPLVARNNGNNTSDVEFQIGTSSASSLGNISGGAMLSNNGLGDQQWRFNNLQQVQHQFPFLSTNFEPQIGVFQFGGGENNNAEPPSYAKGHGGRFNNIRSKMDSINSSVSGIVPQLNTIKLEENQGLSLSKNLLMTSSGNGVLWNNGSSGNAWSEVPSFIPSPNHLL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00833 371 MobiDBLite consensus disorder prediction 124 168 - -
Gma02g00833 371 MobiDBLite consensus disorder prediction 11 56 - -
Gma02g00833 371 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Gma02g00833 371 MobiDBLite consensus disorder prediction 11 31 - -
Gma02g00833 371 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 363 IPR045174 GO:0003700|GO:0006355
Gma02g00833 371 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Gma02g00833 371 Pfam Dof domain, zinc finger 78 134 IPR003851 GO:0003677|GO:0006355
Gma02g00833 371 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 10 363 - -
Gma02g00833 371 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00833 Gma-Chr2 8315953 8317344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00833 1 136 C2C2-Dof Transcription Factor Family AT2G37590 60.690 7.56e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma02g00833 zf-Dof 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00833 - - gmx:100787357 719.153