Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00567 ATGCCGTCGTCGAATTCCGGCGAGAGTCGCCGAGCGAGCAAGCCGCAGAGCTCGGGCGGAGCGGCGCCGCCGCCGCCGGAGCAGGAAAACCTGCCGTGCCCGCGATGCGACTCCACCAACACCAAGTTCTGCTACTACAACAACTACAACTACTCCCAGCCACGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCCGCGACATTCCCGTCGGCGGCGGCAGCCGCAAGAACGCCAAGCGCTCCCGCACCCACCACGTCGCCGCCACATCATCCTCCTCCACCTCGTCCACCATGACGTCAGCACAGGAACACCACGCACACACTTTATTGGCCCCCGTCGCCTCCACGCACTACGGAGTACTTGACGGCGACGTTAAACAGACTAGCAACGGCAACGGTAACGTGTGCGGGAGCTTCACTTCGTTGCTGAACAACACCCATGGCTCCGGGTTTCTCGCCCTGGGTGGCTTTGGGCTTGGACACGGGTATGACGACATGGGTTTTGGCATTGGGAGATCGGGCTGGGCCTTCCCAGGAATGGTCGACGGTGGCAACATTGGCGGCGCCGTCGCGTCTTCTGGCCTAAACACGTGGCAGTTAGAGAGTGGCGAAGGAGGGTTcGTTAGCGGAGATTGCTTCGCTTGGCCTGGGCTTGCGATTTCAACACCGGGAAATGGTCTCAAATGA 705 0.617 MPSSNSGESRRASKPQSSGGAAPPPPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHVAATSSSSTSSTMTSAQEHHAHTLLAPVASTHYGVLDGDVKQTSNGNGNVCGSFTSLLNNTHGSGFLALGGFGLGHGYDDMGFGIGRSGWAFPGMVDGGNIGGAVASSGLNTWQLESGEGGFVSGDCFAWPGLAISTPGNGLK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00567 234 MobiDBLite consensus disorder prediction 90 105 - -
Gma02g00567 234 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 231 - -
Gma02g00567 234 MobiDBLite consensus disorder prediction 72 105 - -
Gma02g00567 234 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Gma02g00567 234 Pfam Dof domain, zinc finger 29 85 IPR003851 GO:0003677|GO:0006355
Gma02g00567 234 MobiDBLite consensus disorder prediction 1 16 - -
Gma02g00567 234 MobiDBLite consensus disorder prediction 1 33 - -
Gma02g00567 234 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Gma02g00567 234 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 231 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00567 Gma-Chr2 5691138 5691842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00567 1 234 C2C2-Dof Transcription Factor Family AT3G50410 49.609 1.83e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma02g00567 zf-Dof 7.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00567 - - gmx:778095 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01328 16 32165046 32166179 Gma02g00567 02 5691138 5691842 ECH
Gma02g00567 02 5691138 5691842 Gma02g00567 02 5691138 5691842 ECH
Gma16g01328 16 32165046 32166179 Gma02g00567 02 5691138 5691842 GST