Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00896 ATGATGCCTCCTCAGCAAGAAACCTCTATTACATCAAACATTCCGGCCATCACCAACCGGCCCGAAAACAGCTCCGCCCACGCCGAACCACCGGGCTCCGCCACCAACGACATTAAACCCACTTTCACGATCAATGACATTCACAACCATACTTCTCAGAACCACCAAGTAGCTCCTTCAGCACCCAGATTTTCTATTCTTCAGCAATCCTTGCGCCCCGTTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACCTTTGGAAGGGACAATAATGGTTGTGTATCTCCTCAAAAGCCAAAGCACACAAGGACAGTGCTGAATGGTGTGACCGGTATGGTGGGGCCAGGGGAGGTCATGGCAATGTTGGGTCCCTCAGGGAGCGGCAAGACCACCTTACTCACCGCCCTCGCCGGCCGTCTTGACGGAAAACTCTCCGGCGCCATCACGTACAACGGCCACCCTTTCTCCAGCTCCATGAAGAGGAACATAGGGTTTGTGTCCCAAGATGACGTGTTATATCCTCACCTCACTGTGCTTGAGAGTCTAACCTATGCTGCCATGTTGAAACTTCCCAAGAGTTTGACTAGAGAAGAGAAAATGGAACAAGTTGAAATGATCATTGTGGACCTAGGGCTGTCCCGGTGCCGGAACAGCCCTGTTGGTGGTGGAGCCGCCTTGTTTCGGGGGATTTCGGGTGGGGAGCGAAAGCGGGTCAGCATCGGGCAAGAGATGTTGGTGAACCCGAGTTTATTGTTGCTGGATGAGCCAACATCTGGGTTGGACTCCACCACGGCTCAACGCATCATGGCGATGCTCCAAAGCCTCGCCGGAGCTTACCGGACCGTGGTGACTACCATTCACCAGCCCTCAAGCCGGTTGTATTGGATGTTTGATAAGGTGGTGGTGTTGTCGGATGGGTACCCGATTTTTACCGGGCAAACGGATCAAGTCATGGATTATCTTGAGTCCATTGGGTTTGTACCCGTTTTCAATTTCGTGAACCCCGCTGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATGCCAAACAAGAAGAGCAGATAGATCACCATGAGGATCAAGCTTCAATCAAACAGTTCCTAGTTTCATCATATAAGAAGAACTTATACCCTCTTCTCAAACAAGAGATTCAACAGAATCATAGAGAACTAGCATTTTTAACTTCAGGAGCACCTAGAAGTTCTGAGAACCAATGGACCACTAGCTGGTGGGAGCAATTCATGGTTCTTCTTAAGAGGGGTTTAATGGAAAGGAGGCATGAATCTTATTCGAGATTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTGTGGTGGCATTCTGATCCCTCACATATACACGATCAGGTAGGCCTGCTATTCTTCTTCTCCATCTTCTGGGGGTTCTTCCCTCTCTTCAATGCCGTCTTCGCTTTTCCATTGGAACGACCAATGCTGATGAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCCTACTATGTAGCCAGGATGGTAGGGGACTTACCAATGGAATTTGTGCTTCCCACCATCTTTGTAACCATCTCTTATTGGATGGGTGGACTCAAGCCATCGTTGGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTTAATGTGCTGGTCTCTCAAGGAATAGGCCTTGCACTTGGTGCCATTCTAATGGATGTGAAACAAGCCACAACCTTAGCTTCAGTGACTATGTTGGTGTTTCTTTTGGCTGGAGGTTACTACATTCGGCATATTCCATTCTTTATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTATTGTTATAAGCTTCTTGTAGGAGTGCAGTACTCAGTAAATGAGGTCTATCAGTGTAGACAGGGATTGCATTATAGGATAAGAGATTTTCCTGCCATTAAGTGTCTAGGGCTTGATAGTTTGTGGGGAGATGTGGCTGTTTTGGCTGTAATGTTGATTGGATACAGAGTTGTGGCTTATTTAGCTTTGAGGATGGGGCTGCATCATTGA 2037 0.4723 MMPPQQETSITSNIPAITNRPENSSAHAEPPGSATNDIKPTFTINDIHNHTSQNHQVAPSAPRFSILQQSLRPVTLKFEDVSYSITFGRDNNGCVSPQKPKHTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLDGKLSGAITYNGHPFSSSMKRNIGFVSQDDVLYPHLTVLESLTYAAMLKLPKSLTREEKMEQVEMIIVDLGLSRCRNSPVGGGAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIMAMLQSLAGAYRTVVTTIHQPSSRLYWMFDKVVVLSDGYPIFTGQTDQVMDYLESIGFVPVFNFVNPADFLLDLANGIVADAKQEEQIDHHEDQASIKQFLVSSYKKNLYPLLKQEIQQNHRELAFLTSGAPRSSENQWTTSWWEQFMVLLKRGLMERRHESYSRLRIFQVLSVSILSGLLWWHSDPSHIHDQVGLLFFFSIFWGFFPLFNAVFAFPLERPMLMKERSSGMYHLSSYYVARMVGDLPMEFVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIRHIPFFIAWLKYISFSHYCYKLLVGVQYSVNEVYQCRQGLHYRIRDFPAIKCLGLDSLWGDVAVLAVMLIGYRVVAYLALRMGLHH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00896 678 MobiDBLite consensus disorder prediction 1 40 - -
Gma01g00896 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 48 675 - -
Gma01g00896 678 Pfam ABC transporter 107 259 IPR003439 GO:0005524
Gma01g00896 678 Gene3D - 76 325 IPR027417 -
Gma01g00896 678 SMART AAA_5 116 309 IPR003593 -
Gma01g00896 678 Pfam ABC-2 type transporter 288 375 IPR043926 GO:0140359
Gma01g00896 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 331 IPR003439 GO:0005524
Gma01g00896 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 48 675 - -
Gma01g00896 678 Pfam ABC-2 type transporter 414 620 IPR013525 GO:0016020|GO:0140359
Gma01g00896 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 324 IPR027417 -
Gma01g00896 678 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00896 Gma-Chr1 28589475 28594755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00896 97 324 Calmodulin-binding Proteins AT2G36910 28.936 1.40e-11 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00896 01 28589475 28594755 Gma01g00896 01 28589475 28594755 ECH
Gma01g00896 01 28589475 28594755 Gma02g01189 02 13425764 13430644 GST