Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00895 ATGACGGACACCACTGACGATATAGCGGAGGAAATCTCCTTCCAGGGCTTCGAAGATGACTGCAAATTGCTAGGGAACCTTCTCAACGACACTCTCCAGCGAGAGGCTGGCTCCACCTTCGTTGACAAGCTCGAAAAAATTCGAGTCCTTTCACAGAGTGCTTGTAATATGAGACAAGCGGGAATGGAGGACATGGCTGAGATGCTAGAGAAGCAATTGGCTTCAGAGTTATCCAAGATGACATTGGAAGAAGCTTTGCCCCTTGCTCGTGCATTTAGCCACCATCTTACTTTGATGGGTATAGCTGAAACCCATCATAGGGTTCGTAAAGGAGGAAATATGGTTCTTACTGCAAAATCTTGTGATGACATCTTTAACCACCTGTTGCAAGATGGGGTTTCTCCAGATGAGCTTTATAACACAGTGTGCAAGCAGGAGGTTGAAATTGTTCTCACTGCTCATCCCACTCAAATTAACCGTCGTACCTTGCAATACAAACACCTTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTAGCCCTGAAGATCGAGATATGTTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACGGATGAGCTTAGGCGTTCAAAACCCACACCAGTTGATGAAGCTAGGGCGGGATTGAATATTGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTTAGCAGCGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGACTTGCACTCCAATAAAGTTTGGATCGTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTGTCAAGATGGATGGCGATTGACCTCTACATTCGGGAAGTGGATGGCCTGAGATTTGAGCTATCCATGAACCGGTGCAGTGAAAAGTTGTCAAGACTGGCACATGAAATTCTAGAAGAAGGTAACAATGAGGAGGATCACCATGAGCATTGGATTGAATCTATGAGTAGAAGTCAATCAAAACATCCTAATCAACAAGCTTCACCAATTCCAACTAAACTTCCAGCTGGTGCTCATTTACCCTCTTGTGCTGGGCCTGAAAAAGGTGGACCTGAGTATCCCAGACACATGCCAGGAGCTGATCACAAGCAACCCAATCACAAGGGTGGTGAGAATTCAAGTTCAACTGAGAGCAATGGTGGCAGTCAAAATGTCCGTTCGCCAATACCAATTTCACCAAATTCCAGTTCTTCTTCATTAGTTTCAGTGACACGCTCTCCTTCTTTCAACTCTAGTCAACTTGTTGCTCAGAGGAAACTGTTTGCAGAATCCCAAATAGGAAGGACCAGTTTTCAGAGGCTTTTGGAGCCAAAGGTCCCTCAGCTTCCTGGAATTGCTCCTTATAGAGTTGTCCTTGGATATATAAAAGATAAGCTTCTGAGAACTCGTAGACGGTTGGAGCTTCTTATCGAGGATGGTCCATCTGAACATGATCCCATGGATTATTATGAAACAACAGATCAGCTTTTGGAACCTCTTCTCCTTTGTTATGAATCTTTGCAATTATGTGGATCTGGGGTGCTAGCTGATGGCCGACTGGCTGATCTGATTCGAAGAGTTGCTACTTTTGGCATGGTGTTAATGAAGCTTGACTTGCGTCAGGAATCTGGCAGACATTCTGAAACAATTGATGCAATTACAAGGTATTTGGATATGGGTGCATACAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACTAGAGAGTTGAAAGGGAAGAGACCACTGGTTCCTCCCAGTATAGAGGTTGCTCCAGATGTTAGAGAAGTCTTGGATACGTTGCGAACTGCTGCTGAGCTAGGGAGCGATTCATTTGGTGCCTATGTGATATCTATGGCCTCAAATGCAAGTGATGTCCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGACTTGCTGCTAGTGGAGAGTTAGGAAGAGCATGTCCTGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTACCGCCAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATATTGTGGCTGCATGCAATGAGTATGGTATCAAGGTTACTCTCTTCCATGGCCGTGGAGGGAGTATTGGCCGCGGTGGTGGCCCAACATATATGGCTATTCAGTCTCAACCACCCGGCTCTGTCATGGGGACCCTTCGATCAACAGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAGACAGCTGTTAGACAGCTTGAGATATACACAACAGCTGTGCTACTTGCTACCCTTCGTCCACCTCAACTTCCACGTGAAGAAAAATGGCGCAATCTCATGGAAGACATTTCAAAGATCAGTTGCCAGTGTTACCGCAATGTAGTGTATGAAAATCCAGAATTCCTGTCCTACTTCCATGAAGCCACACCTCAATCAGAGCTTGGCTTCCTCAACATCGGTAGCCGCCCCACAAGGCGAAAAAGCTCAACAGGAATTGGAAGCCTCCGCGCCATTCCTTGGGTGTTTGCATGGACTCAAACCAGGTTTGTTCTTCCTGCCTGGCTTGGAGTTGGAGCAGGTTTGAAAGGTGCTTGTGAGAAAGGACAAACTGAAGAGCTAAAGGCGATGTACAAAGAGTGGCCCTTTTTTCAAAGCACAATAGACTTGATTGAGATGGTTTTGGGAAAAGCAGATATTCCTATTGCTAAGCACTATGATGAAGTTCTTGTCTCACAGAAGAGACAAGAACTTGGAGAGCAACTGAGGAATGAGCTCATCACAACTGGCAAGTTTGTTCTAGCGGTTAGCGGGCACGAGAAACCTCAGCAGAATAATAGGAGCTTAAGGAAGCTGATTGAGAGTAGACTTCCCTTTCTCAACCCCATAAATATGTTGCAAGTGGAGATACTCAAGAGGCTAAGATGTGATGATGACAACCTTAAAGCCAGAGATGCCTTGCTTATCACCATAAATGGTATTGCTGCAGGGATGAGGAACACTGGTTAA 3171 0.4519 MTDTTDDIAEEISFQGFEDDCKLLGNLLNDTLQREAGSTFVDKLEKIRVLSQSACNMRQAGMEDMAEMLEKQLASELSKMTLEEALPLARAFSHHLTLMGIAETHHRVRKGGNMVLTAKSCDDIFNHLLQDGVSPDELYNTVCKQEVEIVLTAHPTQINRRTLQYKHLKIAHLLDYNDRPDLSPEDRDMLIEDLVREITSIWQTDELRRSKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSSALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDGLRFELSMNRCSEKLSRLAHEILEEGNNEEDHHEHWIESMSRSQSKHPNQQASPIPTKLPAGAHLPSCAGPEKGGPEYPRHMPGADHKQPNHKGGENSSSTESNGGSQNVRSPIPISPNSSSSSLVSVTRSPSFNSSQLVAQRKLFAESQIGRTSFQRLLEPKVPQLPGIAPYRVVLGYIKDKLLRTRRRLELLIEDGPSEHDPMDYYETTDQLLEPLLLCYESLQLCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHSETIDAITRYLDMGAYSEWDEEKKLDFLTRELKGKRPLVPPSIEVAPDVREVLDTLRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAASGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDIVAACNEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPQLPREEKWRNLMEDISKISCQCYRNVVYENPEFLSYFHEATPQSELGFLNIGSRPTRRKSSTGIGSLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGQTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSQKRQELGEQLRNELITTGKFVLAVSGHEKPQQNNRSLRKLIESRLPFLNPINMLQVEILKRLRCDDDNLKARDALLITINGIAAGMRNTG 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00895 1056 MobiDBLite consensus disorder prediction 342 356 - -
Gma01g00895 1056 Gene3D Phosphoenolpyruvate/pyruvate domain 289 355 - -
Gma01g00895 1056 Gene3D Phosphoenolpyruvate/pyruvate domain 426 550 - -
Gma01g00895 1056 MobiDBLite consensus disorder prediction 379 393 - -
Gma01g00895 1056 MobiDBLite consensus disorder prediction 326 429 - -
Gma01g00895 1056 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 1056 - -
Gma01g00895 1056 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1056 IPR015813 GO:0003824
Gma01g00895 1056 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Gma01g00895 1056 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 714 726 IPR033129 -
Gma01g00895 1056 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma01g00895 1056 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma01g00895 1056 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma01g00895 1056 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 1056 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma01g00895 1056 Pfam Phosphoenolpyruvate carboxylase 466 1056 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma01g00895 1056 Pfam Phosphoenolpyruvate carboxylase 18 336 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma01g00895 1056 MobiDBLite consensus disorder prediction 394 429 - -
Gma01g00895 1056 MobiDBLite consensus disorder prediction 326 341 - -
Gma01g00895 1056 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1056 IPR022805 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00895 Gma-Chr1 28495352 28509475 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00895 01 28495352 28509475 Gma01g00895 01 28495352 28509475 ECH
Gma01g00895 01 28495352 28509475 Gma02g01191 02 13617666 13625483 GST