Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00886 ATGAGGAACTTCAAGGCTGTTGGTCAAGCCATCACTGCTCTCTTCATCATCTCTCTGAGTGCATGGTGTTATGGACAAGTAGAACTTGACATGGCTCCAATGGAGAAGGCAGAGCGGGATGCTCTATACTCCACCATTCAAGGCTTTGTTGGTGATTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGCTGGACTCCTATTCAGGGGGTCTCTTGTGATCTGTTTAATGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCCACGATAATTCTCTAAGTTGTGCCAAAATTTTGGAATTCAGACCACAGTTGTTTGAGCTGAAGCACCTTAAAGCTCTATCCCTATTCAAATGCTTTGAATCACAACACAGGCATCAAGTTACCATCCCCAATGCAAACTGGGAAAAGCTTGCTGGCAGCTTAGAATCACTTGAGTTTAGATCAAACAGAGGTCTCATTGGAAAAATTCCTTCAAGTTTTGGTGCCCTCAAGAACCTTCAGTCACTAGTACTATTAGAAAATGGTTTAACAGGTAAAATTCCACCAGATATTGGTAAACTGAACAAGTTGAAGAGGCTTGTTCTTGCTGGAAACCATTTTAGTGGACACATTCCAGATATTTTTAGTGCATTAGGCGAGTTATTAATTCTTGATTTAAGTAGAAATTCACTATCTGGGACTTTACCTTTGACACTTGGAAGCTTAACTTCCCTTTTGAAGCTTGATGTGAGCCATAACCATTTGGAGGGGAATCTGCTGAAAGAATTTGCTTATCTTAAGAATTTGACCCTTATGGACCTTAGGAATAACAGATTCTCTGGAGGGTTGACATTGAGTATTCAAGAGATGTATTCTTTAGAGGAAATGGTTCTGTCCAACAATGCAATAGGTGGGGATATCAGGACCCTTAAGTGGGAAAACCTTCACAACTTGATCATTTTGGATCTCTCTAACATGGGGTTGAAAGGGGAAATTCCTGAGTCTATATCGGAATTAAAGAGGTTGAGGTTTTTAGGCCTTAGTGACAACAACCTCACAGGCAACCTTTCACCAAATCTATCTACTCTTCCTTGTCTCAATGCACTATATGTTAGTGGCAACAATTTGACAGGAGAGCTTAAATTCTCTGTGGAGTTTTATGGAAAAATGAGAACACGTTTTGGGGCCTGGAACAACCCTAGCCTTTGCTACCCTCTTGGAGTAATATCAACAAGTCATGTTCCATATGGGGTAAAACCATGCCAGCAAGAGATCAAATTGCTAAAATCTAATACAACTGATGGGGATGTGAAGAGGACTTTCCATTCCATAGCCTCTTTGAGCCATACTCCTAATTCCTTCTGGTGGATTTTTCTATTTTTTTTAATATCTTATTTAGGTCTTTAA 1398 0.402 MRNFKAVGQAITALFIISLSAWCYGQVELDMAPMEKAERDALYSTIQGFVGDWWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTVLNIGPIHDNSLSCAKILEFRPQLFELKHLKALSLFKCFESQHRHQVTIPNANWEKLAGSLESLEFRSNRGLIGKIPSSFGALKNLQSLVLLENGLTGKIPPDIGKLNKLKRLVLAGNHFSGHIPDIFSALGELLILDLSRNSLSGTLPLTLGSLTSLLKLDVSHNHLEGNLLKEFAYLKNLTLMDLRNNRFSGGLTLSIQEMYSLEEMVLSNNAIGGDIRTLKWENLHNLIILDLSNMGLKGEIPESISELKRLRFLGLSDNNLTGNLSPNLSTLPCLNALYVSGNNLTGELKFSVEFYGKMRTRFGAWNNPSLCYPLGVISTSHVPYGVKPCQQEIKLLKSNTTDGDVKRTFHSIASLSHTPNSFWWIFLFFLISYLGL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00886 465 PRINTS Leucine-rich repeat signature 218 231 - -
Gma01g00886 465 PRINTS Leucine-rich repeat signature 239 252 - -
Gma01g00886 465 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Gma01g00886 465 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 5 428 - -
Gma01g00886 465 SUPERFAMILY L domain-like 42 377 - -
Gma01g00886 465 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Gma01g00886 465 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 5 428 - -
Gma01g00886 465 Gene3D Ribonuclease Inhibitor 35 306 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00886 Gma-Chr1 28277335 28279321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00886 139 391 Receptor kinase-like Gene Family AT2G15080 27.481 3.88e-13 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00886 01 28277335 28279321 Gma01g00886 01 28277335 28279321 ECH
Gma01g00886 01 28277335 28279321 Gma02g00927 02 9857703 9859719 GST