Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00882 ATGGCGTCTGAGACCGCTTCTCGGTCGAGTTCCGCGGCTGATTCGTACATTGGGAGCTTGATAAGCTTGACCTCTAAGAGTGAGATCAGATACGAAGGCATTCTCTACAACATCAACACCGAAGAGTCCAGTATTGGCCTCAGAAATGTGCGATCTTTTGGAACAGAAGGAAGAAAAAAGGATGGCCCACAAATTCCTCCAGGTGACAAGGTTTATGAGTATATACTTTTCCGTGGGACTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCCGTCCAGCCTATTCCACAAGTCAACAATGACCCAGCTATTATTCAGTCTCACTATCCTCACCCGGTCTCTACATCTACAAGTTTGCCTTCTGCTGTAAGTGGATCTTTGACTGATCCTAGCTCTCATACCACACAGCTTGGACTTCCTGGGGCAAATTTTCAAGGGCCCTTGCCTTTGTATCAACCTGGAGGGAACATAGGATCGTGGGGAGCTTCTCCACCTGCTCCTAATGCAAATGGTGGTAGGCTTGCTATGCCACCAATGTATTGGCAAGGATATTATGGTGCTCCAAATGGGCTTCCTCAATTACACCAGCAATCTTTGCTTCAACCACCACCTGGTTTATCAATGCCTTCATCTATGCAGCAGCCAATGCAGTATCCCAATTTCACCCCCTCTTTGCCTAATGTATCTTCTAATTTGCCTGAATTACCATCATCTTTGCTGCCTGTGAGTGCCAGTATCCCTAGTATAACATCTGCTTCCttgcctccagcaccttctgctttggctcctgctccatcagctttgcctcctgcaccatctTCTCTATCTTCTGCATCTTCTGCTTTATCTTCTGTACCTTCTGTAACACTTGCTTCTGAAATTTTGCCAGTATCAGTAACAAATAAGGCACCCATTGTTTCAACTTCAGCAGCCATGTTAGCTTCCAACTTACTATCACTGACCATTTCTGGTCCAGATATAAATGCTATAGTGCCACCCATCTCCAGAAAACTGCATGCAATTTCAGGTTCAAGCTTGCCCTATCAAACTGTATCCCAGTTGTCTTCCACAGTTTTGGGATCATCAACTTCTATCCATACAGAAACATCAGCACCTTCTCTCGTAACCCCAGGTCAATTATTGCAGCCTGGACCAAGTATAGTTTCTTCAGCTCAGCCTTCACAAGCACCTCATAAGGATGTTGAAGTGGTTCAGGTATCTTCAACATCATCTCCTGAGCCATCTGTGCCAGTTTCTGCTGAAACTCAACCACCAATACTGCCATTGCCAGTAACATCACGGCCCAGTTACAGGCCCGGTGGAGCTCCTAGCCAAACTCATCATGGCTATAATTATAGAGGACGTGGAAGAGGAAGGGGAACTGGGGGTTTACACCCAGTCACAAAATTCACTGAGGATTTTGATTTCATGGCAATGAATGAGAAGTTCAAAAAGGATGAAGTATGGGGCCATCTTGGTAAAAGTAAGTCTCATTCAAAAGAAAAAGATGGGGAAGAAAATGCCTTTGATGAAGATTACCAAGATGAAGACAATGACGATGTATCAAACATTGAGGTTAAGCCTATTTATAACAAGGATGACTTCTTTGACTCGCTCTCTTCCAACGTGCATGGTAATGCTTCACAGAATGGAAGGACTAGATACTCTGAACAAATCAAGATTGATACTGAGACGTTTGGCGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGTGGACGTACCCGAGGTGGTTATTATGGAAGAGGAGGGTATGGCTATAATGGACGAGGGAGGGGACGTGGCATGCCCAGTCGCAATTTGTAG 1833 0.4364 MASETASRSSSAADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGTDIKDLQVKSSPPVQPIPQVNNDPAIIQSHYPHPVSTSTSLPSAVSGSLTDPSSHTTQLGLPGANFQGPLPLYQPGGNIGSWGASPPAPNANGGRLAMPPMYWQGYYGAPNGLPQLHQQSLLQPPPGLSMPSSMQQPMQYPNFTPSLPNVSSNLPELPSSLLPVSASIPSITSASLPPAPSALAPAPSALPPAPSSLSSASSALSSVPSVTLASEILPVSVTNKAPIVSTSAAMLASNLLSLTISGPDINAIVPPISRKLHAISGSSLPYQTVSQLSSTVLGSSTSIHTETSAPSLVTPGQLLQPGPSIVSSAQPSQAPHKDVEVVQVSSTSSPEPSVPVSAETQPPILPLPVTSRPSYRPGGAPSQTHHGYNYRGRGRGRGTGGLHPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSKSHSKEKDGEENAFDEDYQDEDNDDVSNIEVKPIYNKDDFFDSLSSNVHGNASQNGRTRYSEQIKIDTETFGDFVRHRGGRGGRGGRTRGGYYGRGGYGYNGRGRGRGMPSRNL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00882 610 CDD LSm14_N 16 87 IPR025609 -
Gma01g00882 610 PANTHER PROTEIN DECAPPING 5-LIKE 5 603 - -
Gma01g00882 610 PANTHER SCD6 PROTEIN-RELATED 5 603 - -
Gma01g00882 610 Pfam FDF domain 470 568 IPR019050 -
Gma01g00882 610 ProSiteProfiles DFDF domain profile. 463 499 IPR025762 -
Gma01g00882 610 SMART FDF_2 469 571 IPR019050 -
Gma01g00882 610 Gene3D - 6 92 - -
Gma01g00882 610 MobiDBLite consensus disorder prediction 419 433 - -
Gma01g00882 610 MobiDBLite consensus disorder prediction 492 522 - -
Gma01g00882 610 ProSiteProfiles TFG box profile. 551 571 IPR025768 -
Gma01g00882 610 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Gma01g00882 610 MobiDBLite consensus disorder prediction 369 466 - -
Gma01g00882 610 MobiDBLite consensus disorder prediction 492 508 - -
Gma01g00882 610 ProSiteProfiles FFD box profile. 529 544 IPR025761 -
Gma01g00882 610 MobiDBLite consensus disorder prediction 571 610 - -
Gma01g00882 610 MobiDBLite consensus disorder prediction 369 418 - -
Gma01g00882 610 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Gma01g00882 610 MobiDBLite consensus disorder prediction 110 134 - -
Gma01g00882 610 SMART LSM14_2 10 110 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00882 Gma-Chr1 28206438 28212146 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00882 01 28206438 28212146 Gma01g00882 01 28206438 28212146 ECH
Gma01g00882 01 28206438 28212146 Gma02g00923 02 9802292 9808694 GST