Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma01g00879 | ATGGCCACTGTCTCTCCCTCACTCCTCTTCTTTGCAAGAGTCTTAGGGCTTGCAGTGGCAGTGCTTGTCCTCATATGGGCCCTTGCCTTTAAGTCCAGCTTCCTCACTCCCTCACTCTCCCAACAAGACCTCATATATGCAGTTCTTCATCCTCTGCTCATGGTCATTGGCTTTATCCTCTTAAGTGGAGAAGCAATTTTGGTGCACAGATGGTTAGTTGGATCAAGGGGGTTGAAGAAATTGGTGCATTTGTGGCTTCAAGGGGTGGCTTTAGCTTCTGGGATCTTTGGGATTTGGACAAAATTCCAGGGAAAGGATGGGATTGTGGCAAATTTCTATAGCCTACATTCATGGATGGGTTTGGCTTCTGTATCCCTCTTCGGAGCCCAGTTGCGACCATCAAAGCTATTTCCACCCACACGGGTTTTGAGGAGGAGGAGGAGGAGGAGGCGTGCCAATTTCGATTTCGAATTGATGTTTCTTTTCAGGGACGAGGCTCGGATCGACTCGGAAGATGGCGGATTATGCATGGGTGCGGTCGTGACCAGTCGAAACACAATCGGCACATGTGGCCTATACCTGCTAACGCGACCACTGTGGCCATCGATCCTTCAACGTCTCAATTTAAATGCAAAACCTGTTTGGGTTGTGTTTGTGTGGATAATGGAAATCTCGGCAACGCTTGAGGGAAAGTTGTTGTTGGTTTCCTTGTTGACTTAA | 720 | 0.4833 | MATVSPSLLFFARVLGLAVAVLVLIWALAFKSSFLTPSLSQQDLIYAVLHPLLMVIGFILLSGEAILVHRWLVGSRGLKKLVHLWLQGVALASGIFGIWTKFQGKDGIVANFYSLHSWMGLASVSLFGAQLRPSKLFPPTRVLRRRRRRRRANFDFELMFLFRDEARIDSEDGGLCMGAVVTSRNTIGTCGLYLLTRPLWPSILQRLNLNAKPVWVVFVWIMEISATLEGKLLLVSLLT | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma01g00879 | 239 | PANTHER | CYTOCHROME B561-RELATED | 5 | 131 | IPR043205 | GO:0016491 | |
| Gma01g00879 | 239 | Pfam | Eukaryotic cytochrome b561 | 49 | 131 | IPR006593 | - | |
| Gma01g00879 | 239 | ProSiteProfiles | Cytochrome b561 domain profile. | 11 | 213 | IPR006593 | - | |
| Gma01g00879 | 239 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 5 | 131 | - | - | |
| Gma01g00879 | 239 | SMART | 561_7 | 49 | 154 | IPR006593 | - | |
| Gma01g00879 | 239 | Gene3D | - | 3 | 196 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma01g00879 | Gma-Chr1 | 28132701 | 28139309 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma01g00879 | 1 | 130 | Chloroplast and Mitochondria Gene Families | AT1G26100 | 66.917 | 4.69e-48 | 157 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma01g00879 | 01 | 28132701 | 28139309 | Gma01g00879 | 01 | 28132701 | 28139309 | ECH | |
| Gma01g00879 | 01 | 28132701 | 28139309 | Gma02g00921 | 02 | 9758909 | 9770261 | GST |