Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00878 ATGTGGTCTGCAACATCCTCCCCTTCCATCTTCCTCCCCCATTCCCTTCTTCGCCCCCTTCCTCGCCGGCGGCCCCTCTGCGCCTCCCTCTCTTGGGCCTCCCCCGACCCATCCGACGGCCTCGGAGGCTGGGCCCTCCTCGACGCCCCGGCCCAACCCGACAACAACAAAGTTGCGGCATTTCCTTCTTATGCCGTTGTTGGCTTCGGCACTTCGCTCGCTCTTGTGCTCGCTGTCTTTGCTGCCTCAAGGAAAGGTTTTAGTTTTCGATTCCCGAGGCCGATGTGGGGTGCTGTGGAGACTCGGCGAGATCAAAACGACGCTCCGGAGTTTGACGTTTCGAGTGGGAGCAAGTCAACGCTGTCCGAGGCCGACCCGGAGAGCAATGTTACCGTTACGCAAGCTGATAAATCTGTAGCTGTAGAAAAGCCTGAACGTGTTGTCATCCCAGTTTCTGTGGATTCTACCCAAGAAGAAGCACTGTCAGTCTTAAAATCACTGAAGATAATTGAAGATGATGTGGAAGCTAATGAATTGTGTACCAGAAGAGAATTTGCTAGATGGCTAGTTAAATCAAATTCTTCCTTGGAAAGGAGTCCTAAACACATGATTGCTCCAATAGTATCACTTTCTGGATCTGTAGTTACTGCATTTGATGATGTCGGTATTGACGACCCGGACTTTAGATCAATTCAAGTCTTAGCAGAAGCCGGTGTGATCCCCAGCAAATTATCTTGGAATAATAGTTTCAATTATGGTGGATCTGACTCTCAAGAAAACATAAATTTTTATCCTGATAGATTCATCTCACGACAAGATCTAATAGACTGGAGAGCTCAGTTGGAGTATGACTTTTTCTCTGGGGTAGTTGACGAGATATCAATTAAAAAAGCAGGTTATATGGATGTGAAGGAGATCACTTCTCCAGCAGTTTATGTGGACATGCTGGCAGGGGATACGAGTATTCTTAGAAAAGTTTTTGGACAGAGCAAGCGATTTCAGCCAAACAAACCTTCAACAAAAGCACAAGCAGCGGTGGCTCTGACAAGTGGCAGGATGAAGGAAGCAATATCAGCTGAATTGTCAAGAATAGAAGCTGAGAATTCTGCCAGGCTGGCTGAGGCAGGAGAGATCTGGTCTGAGTTGCTTAGCCGAGGAGAGATACAGAGATTTTGGGATGAAAAGCTTATTGAAGAGAAAAATCGTGGTTTTGATGTTGAGAGGCTTTATCACGTGGAAGTAAAGAATTTGGAAGAAGAGGAGATCAATCAAGATAAGATATCTGCTGAGTATTTAAAAGAAAAGGCAACAATGGATTGTCAGAAGCAGCTTCTGCTTAACTTAAAGAAAGAAGTTGATGAGATATCAGAAAAAGTCGCATCAGAGAGAGTCACATATGTAGACGAAAGGGATGTTGTACAAAAGTTGCATGAAGATTTAGAATTCAAGCATGAAGAATTGCTCAACACCAAATCCACGCTGGAAGCTGAAAAAGAAGCTCTTCAGATTCTTAGATCTTGGGTAGAGGATGAGGCAAGGAGAAGCCAAGCTCGGGCAGCTGTCCTTGAAGAGGTAGGGCGAAGATGGAAATGGGATGACCAAGCTTGA 1608 0.4577 MWSATSSPSIFLPHSLLRPLPRRRPLCASLSWASPDPSDGLGGWALLDAPAQPDNNKVAAFPSYAVVGFGTSLALVLAVFAASRKGFSFRFPRPMWGAVETRRDQNDAPEFDVSSGSKSTLSEADPESNVTVTQADKSVAVEKPERVVIPVSVDSTQEEALSVLKSLKIIEDDVEANELCTRREFARWLVKSNSSLERSPKHMIAPIVSLSGSVVTAFDDVGIDDPDFRSIQVLAEAGVIPSKLSWNNSFNYGGSDSQENINFYPDRFISRQDLIDWRAQLEYDFFSGVVDEISIKKAGYMDVKEITSPAVYVDMLAGDTSILRKVFGQSKRFQPNKPSTKAQAAVALTSGRMKEAISAELSRIEAENSARLAEAGEIWSELLSRGEIQRFWDEKLIEEKNRGFDVERLYHVEVKNLEEEEINQDKISAEYLKEKATMDCQKQLLLNLKKEVDEISEKVASERVTYVDERDVVQKLHEDLEFKHEELLNTKSTLEAEKEALQILRSWVEDEARRSQARAAVLEEVGRRWKWDDQA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00878 535 Coils Coil 477 504 - -
Gma01g00878 535 Pfam S-layer homology domain 218 274 IPR001119 -
Gma01g00878 535 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 28 534 - -
Gma01g00878 535 MobiDBLite consensus disorder prediction 110 136 - -
Gma01g00878 535 Coils Coil 438 458 - -
Gma01g00878 535 PANTHER SLH DOMAIN PROTEIN 28 534 - -
Gma01g00878 535 MobiDBLite consensus disorder prediction 100 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00878 Gma-Chr1 28087275 28093222 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00878 01 28087275 28093222 Gma01g00878 01 28087275 28093222 ECH
Gma01g00878 01 28087275 28093222 Gma02g00920 02 9738487 9743234 GST