Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00860 ATGCCACCGAAACTCACACTCGTGTTGGTGGTGCTGTTTTTCGCCCCCGTTGACGCGCATTTTCCGGCAACCGGAGAGCTTCCAACGTTCCGCGAGGCGCCGGCATTCCGCAACGGAAGAGAATGCCGCAACCGCGCGCGGAGCGACTCCGTGATCCACATCGCGATGACGCTGGACGCGACCTACCTCCGCGGCTCCGTCGCCGGTGTGTTCTCCGTCCTGCGGCACGCATCATGTCCGGAGAACATCGTGTTCCACTTTATCGGCACCACGCGCCGAAGCACGGAGCTCCGCCGCATCATTACCGCGACGTTCCCGTACCTCGCCTTCTACCTGTACCAATTCGACGCGAACCTCGTCCGCGGCAAGATCTCGTATTCAATCCGACGCGCGCTAGATCAACCGTTGAACTACGCGCGCATGTACCTCGCGGATCTTCTTCCGGCGACCGTCCGGCGAATCATCTACTTCGACTCCGACCTCATCGTCGTTGATGACGTGGCGAAGCTATGGAGCATTGATCTCCACGCGCGCGTGCTCGGCGCTCCCGAGTACTGCCACGCTAACTTCACGAACTACTTCACGCACCGCTTCTGGTCGAACCCTAGCTACGCGGCGTCGTTTAAGGGACGTGACGCGTGCTACTTCAACACTGGCGTAATGGTTATCGATCTATGGAAGTGGCGCGAGGGAAGGTACACGGAGAAGCTCGAGAGGTGGATGCGGATCCAGAAGCGGAACCGCATCTATGAGCTAGGTTCATTGCCGCCGTTTCTGCTTGTTTTCGCCGGCGACGTGGAGCGCGTGGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGATAACCTCGAAGGTCTCTGCCGAGATCTGCATCCCGGTCCGGTGAGTTTGCTTCACTGGAGCGGCAAGGGGAAGCCGTGGCTGCGAATCGATTCAAAGAAGCCGTGTCCGTTGGATAGTCTTTGGGCTCCGTACGATCTCTTCCGTCACTTGCCGTCGCTGTTCTCCGATTCATAG 1017 0.5978 MPPKLTLVLVVLFFAPVDAHFPATGELPTFREAPAFRNGRECRNRARSDSVIHIAMTLDATYLRGSVAGVFSVLRHASCPENIVFHFIGTTRRSTELRRIITATFPYLAFYLYQFDANLVRGKISYSIRRALDQPLNYARMYLADLLPATVRRIIYFDSDLIVVDDVAKLWSIDLHARVLGAPEYCHANFTNYFTHRFWSNPSYAASFKGRDACYFNTGVMVIDLWKWREGRYTEKLERWMRIQKRNRIYELGSLPPFLLVFAGDVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHLPSLFSDS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00860 338 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 337 - -
Gma01g00860 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 53 319 IPR029044 -
Gma01g00860 338 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 12 337 - -
Gma01g00860 338 Pfam Glycosyl transferase family 8 53 310 IPR002495 GO:0016757
Gma01g00860 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 52 331 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00860 Gma-Chr1 27641240 27642256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00860 26 338 Glycosyltransferase AT1G13250 78.438 2.39e-178 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00860 01 27641240 27642256 Gma01g00860 01 27641240 27642256 ECH
Gma01g00860 01 27641240 27642256 Gma02g00908 02 9583271 9584934 GST