Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00822 ATGCCATTCTCTTCTCAAAGACACAGCAGGATCTTCCTACCTTCTCACACTTCCTTGTTCTTGTTCTCTTTGATGAAAAATATGCAAGGCTTCAAGACAGCACAGCCAAGTTCACAACAACTCTATTGTCACTCTTCCTTCTTGCTTAGGGGAAATGACCCCAACCAAAACCCAGCGCGGTTCTCTGATCTTGGGGAGCATCACCATTTCTCTGCTGTTTTTCATCAAGAAGATGCTGCTGATTTAAGTTCAAGTTCTATGTTTAGTGTGAAGTCAAGCAATGTTGTTGGGGGCAGTAACATGCAGTATGGGACGCTGAACACGAATGTTGGGCATGCAGAGATTGGTTCAAGTGGGGGAGGGTGCATGGATACAAGACAGCAACTGATGTACCACAAAGGAGTGACTATGGCAGCCTTGCCTTTGGGGAATGGTCAAGTTGAGAATTGGGCTGATTCAGGCAAAGCAGATAATAGCCAACAGACTGATGATACATCCACAGATATTGATACTGATGATATAATCCCATGCAATAGAGTTAAGAATGGGACACGAATGGTTGTTCACTCCAAGGATGAGACAAAGGTCAAACCTGGAGATCAAAAGACCCTTCGTAGACTGGCTCAGAATCGGGAGGCTGCAAGGAAAAGTCGATTAAGGAAAAAGGCGTATGTACAACAGTTGGAGAGCAGCCGAGTAAAGCTTGTGCAATTAGAGCAAGAGCTTCAACGAGCACGTCAGCAGGGTATATTTATTGCGACTCCAGGGGATCAAGGTCATTTGGCTGTTGGAAATGGTGCCTTAGCATTTGACATAGACTATGCTCACTGGGTTGATGAGCATCAACGTCTTCTCAATGATCTAAGAACAGCAGTAAATTCTCAAATGAGTGATAGTGACTTGCATATTCTGGTAGATAGTGTCATGGCACATTATAACGAGTTATTTAGGTTAAAGAGCTTAGGTACAAAGGCTGATGTATTACACATACATAATGGGATGTGGAAGACACCTGTGGAAAGATGTTTTATGTGGCTTGGTGGATTCCGTTCATCCGAACTTCTCAAGATCATCAAGAACCACCTTGAGCCATTAACAGATCAGCAGTTGATGGGAATTTATAATCTGCAACAGTCTTCCCAGCAGGCTGAGGATGCTTTATCTCAAGGCTTGGAAGCATTGCAACAATCTCTTGTAGAAACACTTTCCTCCATCTCCCTAGGACCCACTGATAGTGGAAATGTAGTTGATTACATGGGCCAAATGGCACTTGCAATGGGCAAGCTTGCTGATCTGGAGAGTTTTGTTCGTCAGGCTGACCTCTTGAAGCAACAAACTCTTCAACAGTTGCAACGAATTTTGACAACGCGTCAAACTGCCCGAGCCCTCCTTGTCCAAACTGATTACATTTCTAGACTAAGAGCGCTTAGTTCGTTATGGTTGGCGCGCCCTAGAGAGTAG 1461 0.4428 MPFSSQRHSRIFLPSHTSLFLFSLMKNMQGFKTAQPSSQQLYCHSSFLLRGNDPNQNPARFSDLGEHHHFSAVFHQEDAADLSSSSMFSVKSSNVVGGSNMQYGTLNTNVGHAEIGSSGGGCMDTRQQLMYHKGVTMAALPLGNGQVENWADSGKADNSQQTDDTSTDIDTDDIIPCNRVKNGTRMVVHSKDETKVKPGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLEQELQRARQQGIFIATPGDQGHLAVGNGALAFDIDYAHWVDEHQRLLNDLRTAVNSQMSDSDLHILVDSVMAHYNELFRLKSLGTKADVLHIHNGMWKTPVERCFMWLGGFRSSELLKIIKNHLEPLTDQQLMGIYNLQQSSQQAEDALSQGLEALQQSLVETLSSISLGPTDSGNVVDYMGQMALAMGKLADLESFVRQADLLKQQTLQQLQRILTTRQTARALLVQTDYISRLRALSSLWLARPRE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00822 486 SMART brlzneu 198 267 IPR004827 GO:0003700|GO:0006355
Gma01g00822 486 Coils Coil 221 248 - -
Gma01g00822 486 Pfam Seed dormancy control 285 359 IPR025422 GO:0006351|GO:0043565
Gma01g00822 486 ProSiteProfiles DOG1 domain profile. 267 483 IPR025422 GO:0006351|GO:0043565
Gma01g00822 486 CDD bZIP_HBP1b-like 202 254 - -
Gma01g00822 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 244 IPR004827 GO:0003700|GO:0006355
Gma01g00822 486 PANTHER TRANSCRIPTION FACTOR TGA9 65 486 - -
Gma01g00822 486 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 65 486 - -
Gma01g00822 486 MobiDBLite consensus disorder prediction 151 165 - -
Gma01g00822 486 SUPERFAMILY Leucine zipper domain 202 245 IPR046347 GO:0003700|GO:0006355
Gma01g00822 486 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Gma01g00822 486 Pfam bZIP transcription factor 202 240 IPR004827 GO:0003700|GO:0006355
Gma01g00822 486 Gene3D - 201 250 - -
Gma01g00822 486 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00822 Gma-Chr1 25684310 25690671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00822 31 486 bZIP Transcription Factor Family AT1G68640 55.745 2.39e-159 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma01g00822 DOG1 1.8e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00822 01 25684310 25690671 Gma01g00822 01 25684310 25690671 ECH
Gma01g00822 01 25684310 25690671 Gma02g00887 02 8950398 8956762 GST