Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00810 ATGGGTAAGAAGCTTGATGCTCTCCTTGGTAGAACCTTCAAGGTATCAAAGTTCAAGGCTATTGTTAACCTTGCCATCTCACGCCTAGCTGTTCTCAAGAACCAGCGCCAGGCTCGCCTTAGACATGCCCGTTCTGATGTCCTTGAACTCCTCCAACTTGGCCACCAAGAACGTGCTTCACTTCGAGTTGAGCATGTGATCAAGGATCAGAACATGTTGGATGTGTATGGCAGGATTGAAGGATACTTCAACCTCTTGATCGAAAGGGTCCACCTCATTGAGCAAGAGAGAGAATGTCCCGAGGAACTGAAGGAGGCAGCATCGGGATTGCTCTATGCAGCTTCAAGGTGTGGAGATTTTCCTGAGATTCAACAGATTCGTGTAATTTTGACATCACGGTTTGGCAAGGAGTTTGCTGCTCGATCTATTGAGTTGAGGAACAACTGTGGAGTCCATCCTCAGATGATACAGAAATTGTCAACAAAGATGCCAAGCCTGGAAAGCAGAATGAAGGTACTCAAAGACATTGCTTCTGAGAATGGTATTGTTCTGCAGCTCGAAGAAACTTCTGTTTCGGTTGAGGAACAATCCAGTGTAGAAAAGCAAAACCAACATGAACCTGAGAAGAAGGAAGAGAATGTAAGCATTTTGCCTAGCAGGGGGAAAGATGAAAAGTTAATTGATTCCTATAAGGGAAGAAAAACGTACAAGGACGTAGCTGATGCAGCACAAGCAGCTTTTGAGTCAGCAGAATATGCTGCAGCTGCTGCAAGAGCAGCACTGGAACTCTCCCGATCTGAATCACATGATCCCGATGATCATGATAGCACAAGACTCCAACCAAGAAAAGTGGAGGAAGGACATGATGTGAGACCTCAAATGGAAGAAAAGGAAATCCTCAGTGAAACTCAAAGAGAAGATGAGTTAAAAAAGTCGAAAGACATTATAAGTTGCAATTCAACTGATGAGGTTTTGAAGGGGGCTACTGCCTTGGTGGATGGTGAAATTGAGGCTGATCCTTTGGAAAAGGAAGTGATTTTCGATGATAGTGATGATGAGAATGATAATAAACAGAATATAAATCAATCTTCTAAGCAGACATCTTCAGGGTATGGTGCTGGTATAGTAGTAAATACAGTGCCAGGATCCAAGATGCAGAATGCGCCTCAGTTGGATTTGCAGAAGAGGCCTATTTCAGTGAGGACTAGATGA 1212 0.4381 MGKKLDALLGRTFKVSKFKAIVNLAISRLAVLKNQRQARLRHARSDVLELLQLGHQERASLRVEHVIKDQNMLDVYGRIEGYFNLLIERVHLIEQERECPEELKEAASGLLYAASRCGDFPEIQQIRVILTSRFGKEFAARSIELRNNCGVHPQMIQKLSTKMPSLESRMKVLKDIASENGIVLQLEETSVSVEEQSSVEKQNQHEPEKKEENVSILPSRGKDEKLIDSYKGRKTYKDVADAAQAAFESAEYAAAAARAALELSRSESHDPDDHDSTRLQPRKVEEGHDVRPQMEEKEILSETQREDELKKSKDIISCNSTDEVLKGATALVDGEIEADPLEKEVIFDDSDDENDNKQNINQSSKQTSSGYGAGIVVNTVPGSKMQNAPQLDLQKRPISVRTR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00810 403 MobiDBLite consensus disorder prediction 199 221 - -
Gma01g00810 403 MobiDBLite consensus disorder prediction 193 221 - -
Gma01g00810 403 MobiDBLite consensus disorder prediction 348 403 - -
Gma01g00810 403 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 8 403 - -
Gma01g00810 403 Gene3D - 6 194 IPR042277 -
Gma01g00810 403 Pfam Regulator of Vps4 activity in the MVB pathway 19 182 IPR005061 GO:0015031
Gma01g00810 403 PANTHER IST1 FAMILY MEMBER 8 403 IPR005061 GO:0015031
Gma01g00810 403 MobiDBLite consensus disorder prediction 359 393 - -
Gma01g00810 403 MobiDBLite consensus disorder prediction 263 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00810 Gma-Chr1 25146854 25149158 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00810 01 25146854 25149158 Gma01g00810 01 25146854 25149158 ECH