Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00809 ATGAAGATTGAGCCAGGGTTGGAAGACGAAGCCAATCCATCCATGTTCAACCACAACGCTTTCCTCCACCACTATCACTGTTTGGCACCCTCAACTAGCCACCAATCACGCGTCGAGCCACCGCGGCTGATCACAAGAACATTAGATGAGATTTTAAACATCGTTCATGCCAAGGAGCAGACTTACCGTGAAGTTAATAGATCGTTTGCCATGAGAACCTCGAAGCGCCACCGCCACCGCCACCGAAGCAGAAAGTCCGACGAAGAAATTGAATGCGGTTGCGAAATTGCTCCGGCGGTTCCTTTTCCGACTCCGCCCCGTAATTCTGGCACGAATTTTCGCGTAATCGACGACGATGATGTCGAAGAAGGAGAAATTTTCGAAGACGACGACGATGTCGCGAAACAGCACGCGCAATCTGAAGCTGAGCCTGGCGAAATTGACCCGACCGGAGATCGAGGTGTTCGATCCGATAACAAAAATCTGGGACATTTTGCCAGGGAGACTTTGTTGCATGCTAAAGATATAGAAACTAAAACTCAGTGCAACGTTGATGATAGATTTATTAGTCCTGATGGAGAAGATGGGGCATGCTATCAGAGTCATGTTGGCCGTGGAATACATGAAGATGGTATGGGGAATGGTCTTTTTGATGGAAAGGATGGTAGAGCTAGTACAGATGGTATGGGCAATGGGCTTTTGGATCATAAACATGGATGTTTTAAAGGAAATGAGAAACTAAAAGGTTATTGTGATGATGAGGATGTGGAGGTTGATGGAGGGAAAGTTGGTTACTATAAAAATTCTTCCTCAGAAAGTGGAAGAGAGAAAGATAGAAGATCAAGATATTCACATTCTCGTGATAGATATAGAAGTCGATCAAGATCAACTGGTCATGCTACGGACAGGTCTCATTCTGGTAGTATAGTGGAAGAACATGCTCGTTCAAAGAGAAAGCACTCTGGTGAACAGGGGGATGATTCATATGCTAGTAGACTGAAGACTGACTATGACCTTGATGATGAAAGAATGATGGCAAGCAGAAGGGAGAGTAGAGATTTGGTGGTGGATAAAAGAAGGGAACACAGGACAAGTTATCATACTCAGGAGGCTTGGGGTAGGGCTAGGAGTAGCGATAGAGATGTTGATAGAGACTTAAAGATGGAAAAAGAACAAGAGAGGAGTAGGAATAGGGAGGTCAATTGGGTGCATAGAAGGGAAAAAGAACGTGAGAGGAGTTGTGAGAGGCACAGAAGGGATGTAGAAAAAGATAGGAGGGAAAGAGAGGATGATAGGGATAGGAGAAGAGAAAAGGAAAGCGATAGGATCCGTGAGACAGTGTTTGAGAGGGATAGGAGAAGGGATAAGGAAAAAGATCAAAGTAGAGACAGAACAAGGGGTGATGAGAGGGTCAGAGACCAGGAGACTGCTGAACATAATGATAGGAGTTGGAAAAGGGATAAAATTAAGGAGAGGGAGAAGCGAGATGATATAAAGAGGCACAAGGATAGAGGCAATGGCATGGGTAAGTATCTGTCTCATGAGGATGATTATTATGATGCTCATGATAGATATAGAAGGCGTTTGAAACAAGAAGAAAGAGAGTGCCACCAAGAAAGAAAAAGAAAATCCTCGCACGTAAAGGTTTATAATTCTATGGGCAGTACCCTGATAGATGATGCAAACAAACTAGAGAGAGGGGAGGATGAACAAGATGACTTAGATGAGAAGGTTACATTGCAATTACCTGATCAAGAAGAGGAAGATTTCAATAGGGTTAAAGAGGAGAGTAGAAGGAGAAGGGAGGCAATCTTAGAGAAATACAAGAAGCAGCATCAACAAATAGAACTAAATACAGAAAATGAAGGAAAAGACAGACAAGCTGTGGAGATTCCTCCTAGCATTCCTGATGCTCTTGATGGTAAGAGTGATGGTGTTGATGATGTGGAAGTTGAAACATTATTCTCAGTCAGGAAATCTCCTGCGGAAAATGGGAATGTTGCTTCTGATAAGATCTCTAGTGCTGGTGGCCTTGGAGAGGGCTCTCCTAAGAGTGAGAGATCAGATGACAAGTTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCAGAAATCAGGTAAAGGAGAAGGTTTACGGATTGAGAGGGGTGGCCTTCACGACAATTGGGATGATGCAGAGGGTTATTACAGTTACCATTTCGGTGAAGTACTTTATGGCCGATATGAAGTCATTGCAGCTCATGGGAGGGGTGTCTTTTCAGCAGTGGTCCGGGCAAAAGATCTTAAAAATAGTAATGGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCTGATCCGGATGATAAGTGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAAGAATCACCTTTGTTTAGTTTTTGAATCTCTCCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCAGTTAGGGCGTATGCTAAACAACTTTTTATTGCACTTAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGATAATATGTTGGCAAAAAATACTTTTAAGTTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATCATACTTGGCTTACCCTATGATCATCCGTTGGATATGTGGTCTGTAGGATGTTGTTTGTATGAACTCTATACAGGGAAAGTTCTTTTTCCAGGTTTTACTAACAATGACATGCTATGGCTCCACATGGAATTGAAGGGTATTTTTCCGAAAAAGATGCTTCGTAAGGGAGCATTTATTGAACAACATTTTGATCAGTACCTGAATTTTCTTGCTACAGAGGAGGACCCTGTGACGAAAAAGGCTATAAAGCGGATGATTGTAAACATAAAGCCAAAAGATATTGGAACAATCATCAGTGGCTCTCCAGGGGAGGATCCAAAGATGTTAACCAATTTTAAGGATCTTATGGAAAAAGTTTTTATATTGGATCCAGACAAGAGGTTGACAGTCTCACAGGCATTGAATCACCCATTCATCACTGGCAAGGGAACAATGTTGCTGATTTTGACTCCCACAATGATGTTCACTGATATTTGTACATAG 3231 0.4209 MKIEPGLEDEANPSMFNHNAFLHHYHCLAPSTSHQSRVEPPRLITRTLDEILNIVHAKEQTYREVNRSFAMRTSKRHRHRHRSRKSDEEIECGCEIAPAVPFPTPPRNSGTNFRVIDDDDVEEGEIFEDDDDVAKQHAQSEAEPGEIDPTGDRGVRSDNKNLGHFARETLLHAKDIETKTQCNVDDRFISPDGEDGACYQSHVGRGIHEDGMGNGLFDGKDGRASTDGMGNGLLDHKHGCFKGNEKLKGYCDDEDVEVDGGKVGYYKNSSSESGREKDRRSRYSHSRDRYRSRSRSTGHATDRSHSGSIVEEHARSKRKHSGEQGDDSYASRLKTDYDLDDERMMASRRESRDLVVDKRREHRTSYHTQEAWGRARSSDRDVDRDLKMEKEQERSRNREVNWVHRREKERERSCERHRRDVEKDRREREDDRDRRREKESDRIRETVFERDRRRDKEKDQSRDRTRGDERVRDQETAEHNDRSWKRDKIKEREKRDDIKRHKDRGNGMGKYLSHEDDYYDAHDRYRRRLKQEERECHQERKRKSSHVKVYNSMGSTLIDDANKLERGEDEQDDLDEKVTLQLPDQEEEDFNRVKEESRRRREAILEKYKKQHQQIELNTENEGKDRQAVEIPPSIPDALDGKSDGVDDVEVETLFSVRKSPAENGNVASDKISSAGGLGEGSPKSERSDDKFCDDIFGETPTGVQKSGKGEGLRIERGGLHDNWDDAEGYYSYHFGEVLYGRYEVIAAHGRGVFSAVVRAKDLKNSNGEPREVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKCHCVRFLSSFKYKNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLAKNTFKFCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPGFTNNDMLWLHMELKGIFPKKMLRKGAFIEQHFDQYLNFLATEEDPVTKKAIKRMIVNIKPKDIGTIISGSPGEDPKMLTNFKDLMEKVFILDPDKRLTVSQALNHPFITGKGTMLLILTPTMMFTDICT 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00809 1076 Coils Coil 515 542 - -
Gma01g00809 1076 MobiDBLite consensus disorder prediction 662 692 - -
Gma01g00809 1076 Pfam Protein kinase domain 744 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00809 1076 MobiDBLite consensus disorder prediction 529 574 - -
Gma01g00809 1076 MobiDBLite consensus disorder prediction 261 515 - -
Gma01g00809 1076 MobiDBLite consensus disorder prediction 130 158 - -
Gma01g00809 1076 MobiDBLite consensus disorder prediction 529 546 - -
Gma01g00809 1076 Gene3D Phosphorylase Kinase; domain 1 714 802 - -
Gma01g00809 1076 SUPERFAMILY Protein kinase-like (PK-like) 730 1068 IPR011009 -
Gma01g00809 1076 PANTHER DUAL SPECIFICITY PROTEIN KINASE 308 1058 - -
Gma01g00809 1076 Gene3D Transferase(Phosphotransferase) domain 1 803 1056 - -
Gma01g00809 1076 SMART serkin_6 743 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00809 1076 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 308 1058 - -
Gma01g00809 1076 CDD STKc_PRP4 742 1055 IPR044092 GO:0004674|GO:0006468|GO:0045292
Gma01g00809 1076 MobiDBLite consensus disorder prediction 271 515 - -
Gma01g00809 1076 ProSiteProfiles Protein kinase domain profile. 743 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00809 Gma-Chr1 25077446 25086950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00809 740 1056 Core Cell Cycle Gene Families AT1G73690 27.660 1.26e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gma01g00809 Pkinase 5.7e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00809 01 25077446 25086950 Gma01g00809 01 25077446 25086950 ECH