Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00546 ATGGAAACATCTTCATCTGTGTCCAATAAGACCATAACATTGGAAGAATGGAACGGTTCTTCCCCCACAAAACTCTCCAAGACTTTCACCATCAAGGCTTCCTCTTCCTCTGTCCTCATCACAAGATCTGGTGCCCGCTTTACCCATGTTTGGAGAAGGTTACTTCAGGCATTTGTCCCTGAGGGTTTTCCAAGCAGTGTGACTGCAGATTATGTTCCTTTTCAAATATGGGACTTATTGCAGGGCCTGTCGACGTATATAAGGACTATGCTTTCTACCCAGGCTCTCCTGAGTGCTATTGGGGTTGGGGAGAAATCAGCTACAGTTATTGGTGCCACTTTTCAGTGGTTTTTGAGAGATCTAACTGGTATGCTTGGAGGAATCTTATTCACATTTTACCAGGGATCAAATCTTGATAGCAATGCAAAAATGTGGCGATTGGTTGCAGATCTTATGAATGACCTAGGAATGCTAATGGACCTCATTTCTCCATTGTTTCCATCAGCTTTTGTATTTGTTGTTTGCTTAGGAAGCATATCAAGATCTTTCACTGGTGTTGCAAGTGGTGCCACTAGAGCAGCTTTGACTCAGCATTTTGCTCTTCAGGATAATGCTGCAGATATATCTGCAAAGGAAGGAAGTCAAGAAACTGTGGCCACAATGATTGGCATGGCACTGGGAATGCTTGTTGCTCGCCTTACCATTGGGCACCCACTAGCCATTTGGTTTTCTTTTTTATCTTTGACCGTGTTTCATATGTATGCAAACTACCGAGCTGTTCGGTGCCTTGCATTGAACTCATTAAACCCTGAAAGGAGCTCTATTCTTTTGCAGCATTTCATGGAGACTGGCCAAGTTCTCTCCCCTAAACAGGTCTCTTCTCAGGAGCATGTTTTACCCATACAGTTCATTTCATGGAGCTCAAAGAAAGCTAATTGTCTGCATAAGAAAGTATGTTTAGGCATGAGGATTTCTTCATTCGATAACATGGAAATCAAGGAGCATTTGCTTTGTGCAGCACCTTACTACACAAAAGCCAAGTATTTACTTGTGGAAAGGAAGGGAATCATTGATGTTATTGTGCATAAAGATTCGAATGCTGCAGATGTCCTAAAGTCATTCTTTCATGCTCTTGTCTTGGCAAAGAATGTTCATAAAAGCAAATCTTTGCATTCAGAGGGTCAAAAATGGATAGATTATCAATATGAAGTATTTATTCAGAAGCTCAAGTCATTAGGCTGGAAAACAGAACGGCTTCTATCACCTATAATATGGAGGGCATACTGGAGCTATGAACCATTGGAAGAAAAAAATGATTAG 1320 0.4136 METSSSVSNKTITLEEWNGSSPTKLSKTFTIKASSSSVLITRSGARFTHVWRRLLQAFVPEGFPSSVTADYVPFQIWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMALGMLVARLTIGHPLAIWFSFLSLTVFHMYANYRAVRCLALNSLNPERSSILLQHFMETGQVLSPKQVSSQEHVLPIQFISWSSKKANCLHKKVCLGMRISSFDNMEIKEHLLCAAPYYTKAKYLLVERKGIIDVIVHKDSNAADVLKSFFHALVLAKNVHKSKSLHSEGQKWIDYQYEVFIQKLKSLGWKTERLLSPIIWRAYWSYEPLEEKND 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00546 439 Pfam Vitamin B6 photo-protection and homoeostasis 48 284 IPR006968 -
Gma01g00546 439 PANTHER RUS1 FAMILY PROTEIN C16ORF58 5 439 IPR006968 -
Gma01g00546 439 PANTHER PROTEIN ROOT UVB SENSITIVE 3 5 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00546 Gma-Chr1 7943178 7949367 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00546 01 7943178 7949367 Gma01g00546 01 7943178 7949367 ECH
Gma01g00546 01 7943178 7949367 Gma02g01067 02 11583838 11587933 GST