Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1140 ATGAAGAGGTTCAATAAAAATCAGGATGATGATGCAGAAATGCTCTCAGATTTGGACAGTCACAGCGTTTTGAAGGATGCGAACAAGAAATGTGGGCTTAATTTGATGCAATTGATGGGATTCTTCGTGGTTTGTTTGATGCTGTTCTCTGTACTGTTTTCGGTGTCGGTGGTTCTTCGAGACCCACCCTCAGATGGTGTTGGCGAAGCATCTACATCAACTGTATTTGAAGCTAAAGAAAGCGAAGGTTTGAACAAAGATGCCTCTGAATCTGTTGAGTTGCTAAAAGATGAACTTTTGGGTGGCCTACTTGCTTCTGGGTTCAATGACAGATCTTGTCTCAGCAGATATGAGTCAGTCTTGTATGGCAAAGGACTATCAGGAAAACCTTCTTCTTACCTCATTTCTAGGTTAAGAAAATATGAAGCTGTCCACAAAGAATGTGGACCCTATACTGAATCCTATAACAAAACATTGAAAGAACTCAGGTCTGGCCATGTTTCTGGGTCCTCAGATTGTAAATATGTAGTTTGGATTTCATTTAGCGGGTTAGGGAATAGGATATTGACCTTAGCATCTGCGTTTCTTTATGCTATGCTCACAAACCGTGTCCTACTGGTTGATCCTGGAGTTGATATGATCGATCTCTTTTGTGAACCATTTCCAGATGTTTCCTGGTATCTACCTCCCAATTTTCCCCTTAAAAGTCAAATGTATGATTTCAGTCAGCAATCTGCTCAATGTTATGGGAAAATGCTGAAAAATAAATTAATTACAAATTCCACAGTGCCGTCTTTCGTCTACCTTCATCTAACCCATGATTATGATTATCATGATAAGCTATTCTTCTGTGATGAAGACCAAAGTTTTCTCCAGAAGGTACCTTGGTTAATGATGAAAACAGATAACTACTTCATTCCATCTCTATTCTTAATGCCATCTTTTGAGCAGGAACTGAGTAATCTCTTCCCAAAGAAGGAAACAGTTTTCCATTTCTTGGGTAGATATTTGTTCCACCCCACGAATAGGATATGGGGACTTGTCATCAGATACTATCAAGCTTATTTAGCTAGAGCTGATGAAAGAGTAGGCATCCAGATTAGAGTGTTTGACACTGGCACAGGTCCATTTCAACACGTAATGGATCAGATTCTAGCTTGTACTTTGAAAGAGAATCTCTTGCCTGATGTTAACAGGCAGCAAGATATTGTAAGTTCGTCAGGAAAGCAAAATTCGAAAGCAGTATTGATGACATCTTTGAGCTCAGGGTACTTTGAGAAGGTAAGAAACATGTATTGGGAATATCCTACTGTGACAGGAGAGGCGGTTGGAATTTACCAGCCAAGCCATGAAGAGTATCAGCAAACGGAGAAGCAGATGCACAACCAAAAGGCTTGGGCAGAAATGTATCTGTTAAGCTTAACTGATGTACTGGTTACTAGCTCATGGTCAACTTTTGGTTATGTGGCTCAGGGTCTTGGAGGTTTAAAGCCATGGATACTCTACAAGCCTGAGAATGGAACAGCCCCTGATCCTCCATGTCAGCGGGCCATGTCAATGGAGCCTTGCTTCCATGCTCCTCCATTCTATGACTGCAAGGCTAAAAGAGGAACCGACACAGGTGCACTAGTTCCATACGTAAGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTTGACAATTAA 1689 0.4127 MKRFNKNQDDDAEMLSDLDSHSVLKDANKKCGLNLMQLMGFFVVCLMLFSVLFSVSVVLRDPPSDGVGEASTSTVFEAKESEGLNKDASESVELLKDELLGGLLASGFNDRSCLSRYESVLYGKGLSGKPSSYLISRLRKYEAVHKECGPYTESYNKTLKELRSGHVSGSSDCKYVVWISFSGLGNRILTLASAFLYAMLTNRVLLVDPGVDMIDLFCEPFPDVSWYLPPNFPLKSQMYDFSQQSAQCYGKMLKNKLITNSTVPSFVYLHLTHDYDYHDKLFFCDEDQSFLQKVPWLMMKTDNYFIPSLFLMPSFEQELSNLFPKKETVFHFLGRYLFHPTNRIWGLVIRYYQAYLARADERVGIQIRVFDTGTGPFQHVMDQILACTLKENLLPDVNRQQDIVSSSGKQNSKAVLMTSLSSGYFEKVRNMYWEYPTVTGEAVGIYQPSHEEYQQTEKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPDPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPYVRHCEDMSWGLKLVDN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1140 562 Coils Coil 78 98 - -
Glsi13g1140 562 FunFam Galactoside 2-alpha-L-fucosyltransferase 171 222 - -
Glsi13g1140 562 Gene3D - 170 217 - -
Glsi13g1140 562 Pfam Xyloglucan fucosyltransferase 81 533 IPR004938 GO:0008107|GO:0016020|GO:0042546
Glsi13g1140 562 PANTHER FUCOSYLTRANSFERASE 2-RELATED 40 561 IPR004938 GO:0008107|GO:0016020|GO:0042546
Glsi13g1140 562 FunFam Galactoside 2-alpha-L-fucosyltransferase 346 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1140 Glsi-ChrGlsi13 29096015 29098938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1140 36 560 Xyloglucan Fucosyltransferase1 AT2G03220 62.928 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1140 13 29096015 29098938 Glsi13g1140 13 29096015 29098938 ECH