Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0887 ATGGGAGAGATCAGAACGAGGATACTCGGCAATTGTTCATCTTGCTGCCCCACCATGCCTCCACAGCTCCAAACCCACCTAATCACAATTGCAAATATGGTGTGTTTCACTCTCTTGATCCTTTTCTTCTCTGGTATCATCCAGTTCCCATCATCTTTCATCTCTCTATCCTCATTCTCACGTCGACCCATCAACGATTCTTCAAACTCCCATGGCTTCACGGATCTGGTTGGGGCCTTTAGGAGGTGGGATTCTGAGGTGGGTTGTGATCGGTTTAAGGAGAAACATGGGAATTCTTCGGCGGCTTCTTCTGGTTTGCAAGGGATTGATCATGGGGATTGTGGGAGGTTGAAGATGAAGCATGTGAGCGTTCTGGTGAAAGGGTGGCATTGGATTCCCGATAATTTAGATAATCTTTACTCTTGCCCATGTGGTTTGAGCTGTTTGTGGACTAAATCCCCAGTTCTTGCTGACAATCCTGATGCTTTGTTGTTCGAAACTACTAAGCCTCCGCTCAAGAGAGAGAGTGGAGAAGCGCTTAGAGTGTACATGGATCTCGAACCAGAGAGAAAACGATCGGGTGGTGAGGATATATTCATCAGTTATCATGCTGAAGATGACGTTCAGACAACCTATGCGGGTGCCATGTTCCACAATGATCGAAATTACCACATTGCCTCCTTTAAGAACACCGGTCCACTAGTTTACTGGTCTTCATCCCATTGTGTTTCTCAAAGGAACAAACTTGCCCAGAGCCTTCTCTCCAAGCTCCCTCACCATTCCTTTGGCAAGTGCCTCAACAATGTTGTTGGCACCAAAAACAAGGCCCTTTCTCTCTACCCTCACTGTGCTCTCAAATCCAAAGCCACCCCAAAATGGTGGGACCACTTGCACTGTGCTATGTCCCACTACAAGTTTGTGCTTGCAATTGAGAACACTCGGGCTCAAAGCTATGTCACAGAGAAGCTATTCTATGCCTTGGACTCTGCCTCAGTTCCAATCTACTTTGGCGCACCAAATGTAGAGGATTTTGTGCCTCCACATTCAATTATAGATGGCACTAAATTTGGGTCTTTGGAAGAGTTGGCTTTGTACGTGAAGGCTCTGGCTAATGACTCTCTAGCTTATGCAGAATACCATGCATGGAGGAGATGTGGGGTTTTGGGAAACTATGGGAAAACCAGAGCACTGAGCCTTGATACCTTGCCTTGCAGGCTCTGTGAGGCTATAAGCAAGAAAGGAGGAAGAAATGCAGATGCCAAGCTTGGTTGA 1272 0.467 MGEIRTRILGNCSSCCPTMPPQLQTHLITIANMVCFTLLILFFSGIIQFPSSFISLSSFSRRPINDSSNSHGFTDLVGAFRRWDSEVGCDRFKEKHGNSSAASSGLQGIDHGDCGRLKMKHVSVLVKGWHWIPDNLDNLYSCPCGLSCLWTKSPVLADNPDALLFETTKPPLKRESGEALRVYMDLEPERKRSGGEDIFISYHAEDDVQTTYAGAMFHNDRNYHIASFKNTGPLVYWSSSHCVSQRNKLAQSLLSKLPHHSFGKCLNNVVGTKNKALSLYPHCALKSKATPKWWDHLHCAMSHYKFVLAIENTRAQSYVTEKLFYALDSASVPIYFGAPNVEDFVPPHSIIDGTKFGSLEELALYVKALANDSLAYAEYHAWRRCGVLGNYGKTRALSLDTLPCRLCEAISKKGGRNADAKLG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0887 423 PIRSF FucT_plant 19 421 IPR017177 -
Glsi12g0887 423 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 234 414 IPR001503 GO:0006486|GO:0008417|GO:0016020
Glsi12g0887 423 Gene3D - 185 387 IPR038577 -
Glsi12g0887 423 FunFam Alpha-(1,4)-fucosyltransferase 181 388 - -
Glsi12g0887 423 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 115 413 - -
Glsi12g0887 423 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 118 414 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0887 Glsi-ChrGlsi12 26554898 26558428 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0887 33 418 Xyloglucan Fucosyltransferase1 AT1G71990 66.667 0.0 550