Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0937 ATGCAAAACCAAACCAGAGTCCGGAGGGAGAGGGAGAATAAGCTGTATAGTCATCAGACGAAAGGGGGAGATTCTTTCTTTATAAGTAAAAGCGATCCGACGGTGCAGCACCGTCCACAACTAAAAAAGTTGAGTGATGGGAATTGGGATCGGGACCTCAAGTTTGTGTCTCTTTTTGGATTTAGATATTCTGGTTCCAATTCTAATTCTTACGTCACCGACACGTTTCGCTGTCACATGAGAGCTCCTCCTTATTTGACATTCCCAAACAGCAAAATGTTCCGTCATTCAGAGTCATTTCTCGCCAGTAATTACTCTGTTTGTTTCCTCCCTCCCCGAGCTGAAGCTGCTGGCTTGAAGTTCGAGCCGGAGCCGCCGCCGCCGCCCTCTGTCTCTGCTTCTGATTTTGGGATTGGAGTGGTTAAACCTATGGAAGGCTCAAAGCCTCCTATGTCGGAGAGAAAGACAAGGCCTCAGAAAGATCAAGCTTTGAACTGCCCAAGAAGGTATTGGACGGAGGGTGGGTCTTTGAGAAATGTTCCTGTCGGTGGAGGCTCAAGAAAAAACAAGAGATCAACTTGTTCATCACCATCAACATCATCGGCAAAGAAGCTTCCTGATCTGACAACACCAAATTTTTCTCAGTCTGCTTCTCAGAACCCAAAGATCCATCAAGGCCAAGATCTTAACTTGGCATATCCGCCAGCTGAGGACTATAATAGCATATCGAAGTTTATTGAGGTTCCTTACGGCACTGAAGACAAGAGTCATCAGAATCTTCAAAATCTCAATTCCTCATCAACATCTTCTCAGTTATCTCCTATGGAACTTCTCAAAACTGGGATTACGTCATCAAGGGGTTTAAATTCTTTCATGCCCATATCCGTATCAGATTCCAGTACAATGTATAATCCAACTGGGTTTCCTTTGCAAGACTTTAAGCCAGGCCTTAACTTCAGTCTTGAAGGGTTTGAAAATGGCTATGGGGGTATTCAGGGAATCCAAGAGGGCACTGGTGCCAGGATCTTGTTTCCTGTTGAGGATTTGAAGCAAGTTCCAAGCACTTCTGATCAGTATGAGCATAATAGAAGCCAAGGGGATTCTACGGGTTATTGGAATGGCGTGTTAGGTGGAGGATCGTGAAGTTCAGAACCACTAACATATAGAGTACATGGCTTCTGTTTAATTTGCTTCTTTAATCCATTTCCCTTGTGGTCTTCTTTTTCTTTCCCTACTTCTTCCGTTTTGATTTTGGCTTTGGATCCAGAAGAATGCGGATGCATGTTGGAAGTCATAACCTGTATCTTTAGTTTTGAACTTTTCCGTTTGGCTAGAACTATACTTATAGTTCTTGGACTTCAACAAGGATCTTCCCTCGCAATCTGCTTCTAA 1392 0.4375 MQNQTRVRRERENKLYSHQTKGGDSFFISKSDPTVQHRPQLKKLSDGNWDRDLKFVSLFGFRYSGSNSNSYVTDTFRCHMRAPPYLTFPNSKMFRHSESFLASNYSVCFLPPRAEAAGLKFEPEPPPPPSVSASDFGIGVVKPMEGSKPPMSERKTRPQKDQALNCPRRYWTEGGSLRNVPVGGGSRKNKRSTCSSPSTSSAKKLPDLTTPNFSQSASQNPKIHQGQDLNLAYPPAEDYNSISKFIEVPYGTEDKSHQNLQNLNSSSTSSQLSPMELLKTGITSSRGLNSFMPISVSDSSTMYNPTGFPLQDFKPGLNFSLEGFENGYGGIQGIQEGTGARILFPVEDLKQVPSTSDQYEHNRSQGDSTGYWNGVLGGGSXSSEPLTYRVHGFCLICFFNPFPLWSSFSFPTSSVLILALDPEECGCMLEVITCIFSFELFRLARTILIVLGLQQGSSLAICF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0937 463 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 168 270 IPR045174 GO:0003700|GO:0006355
Glsi08g0937 463 MobiDBLite consensus disorder prediction 148 162 - -
Glsi08g0937 463 Pfam Dof domain, zinc finger 166 191 IPR003851 GO:0003677|GO:0006355
Glsi08g0937 463 MobiDBLite consensus disorder prediction 186 226 - -
Glsi08g0937 463 MobiDBLite consensus disorder prediction 118 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0937 Glsi-ChrGlsi08 6925157 6928972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0937 151 383 C2C2-Dof Transcription Factor Family AT3G61850 36.331 7.76e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi08g0937 zf-Dof 1.4e-08 No_clan