LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi06g0083	ATGGATAAAACATGGTTGAGTTTCAAGAGATTCAGAACATTCCTGATTGTAGCTTCCATAGCTTTCCCTATTTTAGTCGTAGTTACGCTGATGCACCAAAACTCAATCTTTGATCTCGTTGAGGAATTTCCCAAAATTAATATGTTGGGTGGAAGAATTCAGAATGATACCGCTAACGTCTTAAGGGGAGCTGAAAATGTTACCCATCAAGCTAGTGGAGGAAAAGTCCAGAATATTGCAGGGTCAGAGGTAGTCCAGGACAAAGTGCTGGGAGAAAAAGCTCACGATGTTGTTCCTGTCGCCTTCGAAGAAAGAATTCCAAAAAACATCACTTCAGATGCTGGTCCAAAGAATCAGTCGATTGCAGATCTGAGTAATGATTCATCTCCATCCTCAAGCGTTACTAATGACAAATTCCTTGACGAACTTCTAGCTTCCACGTTTGAAGAAGGATCATGCTTAAGTAGGTATCAGTCTTACTTATATCACAAAGCATCCCCTCATAAACCCTCTTCATATCTGAAATTCAAGTTACGTTACTATGAACGAATTCATAGAAGTTGCGGACCCCTTGCTAAATCCTTTGATAAAATCATGAAAAAGGGCATAAGATCTAGCAAAACTAATGCAGCTACGAAGTGCAAATACCTTGTTTGGACAGCTGCCAATGGCTTAGGGAACAGGATGGTAACCTTGGCTGCAGCATTTCTTTATGCTATACTCACAGACCGAGTTCTACTTGTCAGATTTGGGACTGATATGGTTGGTCTCTTCTGCGAGCCATTTCCTAAGTCATCATGGTTATTGCCCAAGAATTTTCCTTATTGGAAAAATCAGAAACATATGGAAACTTATGAAAGCATGTTAAAGAATGACAAGACAAATAATTCAAAGGAGTTGTGGCCATCATCTCTTATTCTTAATCTACAACACACCCATGATGGCCATGAAAACTTTTTTCAGTGTGATTATAGTCAAGATCTTTTACAGAAAGTTCCTGTGTTGATTTTGAGGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCTTTCAGGCAAGAGCTAAGTAAAATGTTCCCAGAAAAAGACACTGTTTTCCACCATCTGGGACGCTACCTTTTTCACCCATCAAATGAGGCATGGCAACTAATTAGCAGGTTCTATCAAGCACACTTGGCCAAAGCAAATGAGAGGATTGGCTTCCAAATAAGATTATTTAATCCTCGTCGAGCACCACACCAAACTGTCATTGATGAAATTTTAGCTTGTACCCTCAAGCATAAACTGCTACCTAAATTAGACATACAAAAGTCAGTAATTTCTCCATTGAAGAACCAAACCTCAAAAGCTGTTCTAGTTGCATCATTATACTCAGAATATGGTGAGAAGCTAAGGACTATGTATTTGACTAACACAACTGAGACTGGGGCAGTTATAAGAGTTTACCAACCAAGTCATGAAGAGCATCAAAAGTCGAATGATAACATGCACAACATGAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTGATCACTAGCCCCAAGTCGACTTTTGGGTATGTTGCCCAAAGTCTTGGAGGTTTGAAGCCATGGATTCTGCAGAGAGCACATGGTGAAAAGATCCCTAATCCACCTTGTCTGCGGGCCATGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGCATGATTGTTGGGCCAATAGCATAGTAAATGTTACTTCCCATTTTCCTCACATTAGGCATTGTGTAGATGTAAGTGGCGGAATGAAGCTGGTTAATGATTATCGTTAG	1809	0.3991	MDKTWLSFKRFRTFLIVASIAFPILVVVTLMHQNSIFDLVEEFPKINMLGGRIQNDTANVLRGAENVTHQASGGKVQNIAGSEVVQDKVLGEKAHDVVPVAFEERIPKNITSDAGPKNQSIADLSNDSSPSSSVTNDKFLDELLASTFEEGSCLSRYQSYLYHKASPHKPSSYLKFKLRYYERIHRSCGPLAKSFDKIMKKGIRSSKTNAATKCKYLVWTAANGLGNRMVTLAAAFLYAILTDRVLLVRFGTDMVGLFCEPFPKSSWLLPKNFPYWKNQKHMETYESMLKNDKTNNSKELWPSSLILNLQHTHDGHENFFQCDYSQDLLQKVPVLILRSDQYFVPSLFMIPSFRQELSKMFPEKDTVFHHLGRYLFHPSNEAWQLISRFYQAHLAKANERIGFQIRLFNPRRAPHQTVIDEILACTLKHKLLPKLDIQKSVISPLKNQTSKAVLVASLYSEYGEKLRTMYLTNTTETGAVIRVYQPSHEEHQKSNDNMHNMKAWTEIYLLSLCDALITSPKSTFGYVAQSLGGLKPWILQRAHGEKIPNPPCLRAMSMEPCFHYPPKHDCWANSIVNVTSHFPHIRHCVDVSGGMKLVNDYR	602

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi06g0083	602	Pfam	Xyloglucan fucosyltransferase	126	570	IPR004938	GO:0008107\|GO:0016020\|GO:0042546
	Glsi06g0083	602	PANTHER	FUCOSYLTRANSFERASE 2-RELATED	37	599	IPR004938	GO:0008107\|GO:0016020\|GO:0042546
	Glsi06g0083	602	MobiDBLite	consensus disorder prediction	109	133	-	-
	Glsi06g0083	602	MobiDBLite	consensus disorder prediction	112	133	-	-
	Glsi06g0083	602	Gene3D	-	383	538	-	-
	Glsi06g0083	602	Gene3D	-	211	302	-	-
	Glsi06g0083	602	FunFam	Galactoside 2-alpha-L-fucosyltransferase	212	263	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi06g0083	Glsi-ChrGlsi06	660842	663247	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi06g0083	132	598	Xyloglucan Fucosyltransferase1	AT2G03220	50.847	9.90e-168	488