Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0974 ATGATGTCACCGGATAATAACAATCCTCCTTCTAAGCCGGCGACCAAAGATGAGAACCAGGGCTCCGGTAGCCGGAAAAGCACCTCCACCAGGCCTTCAGAACCAGGCCTAAAGTGCCCACGATGTGACTCTCCCAACACCAAATTCTGCTACTACAATAATTACAGCTTGACTCAGCCCAGGCATTTCTGCAAGACTTGTCGTAGGTACTGGACAAAAGATGGAGCTTTGCGAAACGTTCCTATCGGCGGTGGGTGCCGGAAGAACAAGAAGGTGAAACCATCATCTAGGCTTTCAAGTGATTCCAAAGACTCTGGTTCTTCTTCAGAGCTGGGGGGTCTCAAATTGTTTCATGGTCTTTCCCCTTCTGTGGATTTCCAGCTTGGCGGGTTACCCTTCCCTAGGCTGCATCAAACTCCACCAGCTTATAACCAGTTCTCCTCTTTTGCGGACGTTTCAGCCACTTCTGCTTCTGGTTTCAACCTGGATCCTCCTAATAGCTCAAATTCTTTGATTGGGTTTAATTACCCATTTTCTTCTTCCTCCGGGAGTGGATTTAATGGTGCAATTCAGAGCGCAAGCTCCATGAACGTTCATAGTAGCCTTGCTTCTTCAATTGAGTCACTGAGTTCTATTAACCAAGACTTGCACTGGAAGCTGCAGCAGCAGAGACTAGCGGTGCTTTTTGGTGGGGATAACCTAAAAGATCATAACAGCGTTTCGCCAGTTAACCTTGAGAGCCAGAGCCAGAAACCACAACCCATTTTGTTTCAGAACCTTGAGATTTCAAAGCCAGAGATCTGCCCCGTTGGTAATTCCAGAAGAGAAGGGCCAAGTGGGGATACAACGACTGAGTGGTTCTTTGGGAGTTCTTTTGCGTCAGTGACTCCTACACCGACTACCAGTAGCGGTGGAAATGGCAATGATAATGCAAGCAACTGGGGTAGTGTCCATGCTTGGAATGATGTGCAGCAGCAATATAATGCTTTGCCCTAG 996 0.4779 MMSPDNNNPPSKPATKDENQGSGSRKSTSTRPSEPGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKDGALRNVPIGGGCRKNKKVKPSSRLSSDSKDSGSSSELGGLKLFHGLSPSVDFQLGGLPFPRLHQTPPAYNQFSSFADVSATSASGFNLDPPNSSNSLIGFNYPFSSSSGSGFNGAIQSASSMNVHSSLASSIESLSSINQDLHWKLQQQRLAVLFGGDNLKDHNSVSPVNLESQSQKPQPILFQNLEISKPEICPVGNSRREGPSGDTTTEWFFGSSFASVTPTPTTSSGGNGNDNASNWGSVHAWNDVQQQYNALP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0974 331 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Glsi05g0974 331 Pfam Dof domain, zinc finger 37 91 IPR003851 GO:0003677|GO:0006355
Glsi05g0974 331 MobiDBLite consensus disorder prediction 82 109 - -
Glsi05g0974 331 MobiDBLite consensus disorder prediction 296 315 - -
Glsi05g0974 331 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 224 IPR045174 GO:0003700|GO:0006355
Glsi05g0974 331 MobiDBLite consensus disorder prediction 1 34 - -
Glsi05g0974 331 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0974 Glsi-ChrGlsi05 59797066 59798061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0974 2 331 C2C2-Dof Transcription Factor Family AT5G65590 41.983 1.05e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi05g0974 zf-Dof 1.3e-31 No_clan