LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi03g1906	ATGGGTCTCGTGTCGAACCCAAGAGGAACAAGGACAGAGACGACCCAAGAAGGTTTACCGGTTTCCATAGGTGCTTCAGCGGTTCCCAAGAAGAAATGTTCTAGTCTATTGCCTCTGTTTGTGGCCCTCGTGGTCATTGCAGAGATCGCTTTCTTGGGTAGGCTGGATACGGCGAAGAACGCAGATATGGTCGATACCGTGGCTGACTTGTTCTACCGGTCCGGTGAAGTAGCTGCAGTGGACGATTTGGGCATCGATATGCTGGGTGGTGACCGGAATTCAGAATCCGAGAGCTGTGAGGAATGGTTGGAGAGGGAGGATGCTGTGACATATTCAAGGGACTTTACGAAAGAACCTATTTCGGTTGCTGAATCGCAGATGCAGGAGGGGATGTCGTGTTCTGTGGGATGCAAGTTTGGCTTTAATGTAGGCAAAAGCGCTGATGCTGCATTTGGCTCACTTAAGCGAGTTGGGGCAGCTAGCATTCTACGATCAATGGAATCATCTGAATATTATCTGGAAAACAATATTGCAGTGGCACGACGGAAGGGGTATGACATTGTAATGACAAGCAGTCTATCATCTGATGTTCCAGTCGGGTATTTTTCCTGGGCTGAGTATGACATCATGGCACCAGTGCAGCCAAAAACTGAAAGTGCTCTTGCTGCTGCATTTATTTCCAACTGTGGTGCTCAAAATTTCCGGATGCAAGCTCTTGAGGCACTTGAAAAATCAAACATCACAATTGATTCTTATGGTGGCTGCCATAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAACTCTGAAGCGCTACAAATTTAGCTTGGCATTTGAGAATTCTAATGTAGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAGCTGTCCCTGTCTTTATTGGTGCTCCAAATATTCAGGATTTTGCTCCTTCCCCTGGTTCAGTTTTACATATTAAAGACCTGGCAGATGTTGAGTCAGTTGCTAGGACCATGAGGCTGCTAGCAGAAAATCATGAAGCATATAACCAATTTTTGAGGTGGAAGTACAAAGGCCCATCCGATTCTTTCAAGGCACTTTTGGATATGGCAGCAGTGCATTCATCTTGCCGCCTTTGCATTTACTTGGCCACAAGGATTAGAGAGAAGGAAGAAAAGAGCCCGGGCTTTAAAAAACGCCCTTGTAAGTGCACTAACGGCTCAGAAACTGTATATCACGTATATGTGAGAGAAAGGGGAAGGTTTGAGATGGAGTCCATTTACTTGAGGTCTAGCAATATGACTCTGGAGGCCTTGAAGTCTGCTGTTGTTTCGAAGTTCACATCCCTGAATCATGTACCTGTATGGAAAACCGAGAGACCTGCAAGCATAAGAGGAGGCAATGAATTAAAAATTTACAGAATATACCCTGTTGGCTTGACCCAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGACATGTGGATTTTAGAAATCACGTGGAAAGCAATCCTTGTGCAAAGTTTGAAGTCATATATGTCTAA	1533	0.4488	MGLVSNPRGTRTETTQEGLPVSIGASAVPKKKCSSLLPLFVALVVIAEIAFLGRLDTAKNADMVDTVADLFYRSGEVAAVDDLGIDMLGGDRNSESESCEEWLEREDAVTYSRDFTKEPISVAESQMQEGMSCSVGCKFGFNVGKSADAAFGSLKRVGAASILRSMESSEYYLENNIAVARRKGYDIVMTSSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGAQNFRMQALEALEKSNITIDSYGGCHRNRDGRVNKVETLKRYKFSLAFENSNVEDYVTEKFFQSLVAGAVPVFIGAPNIQDFAPSPGSVLHIKDLADVESVARTMRLLAENHEAYNQFLRWKYKGPSDSFKALLDMAAVHSSCRLCIYLATRIREKEEKSPGFKKRPCKCTNGSETVYHVYVRERGRFEMESIYLRSSNMTLEALKSAVVSKFTSLNHVPVWKTERPASIRGGNELKIYRIYPVGLTQRQALYTFSFKGHVDFRNHVESNPCAKFEVIYV	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi03g1906	510	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	128	386	-	-
	Glsi03g1906	510	FunFam	Glycoprotein 3-alpha-L-fucosyltransferase A	167	359	-	-
	Glsi03g1906	510	Pfam	Glycosyltransferase family 10 (fucosyltransferase) C-term	219	384	IPR001503	GO:0006486\|GO:0008417\|GO:0016020
	Glsi03g1906	510	Gene3D	-	166	360	IPR038577	-
	Glsi03g1906	510	PANTHER	ALPHA- 1,3 -FUCOSYLTRANSFERASE	44	460	IPR001503	GO:0006486\|GO:0008417\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi03g1906	Glsi-ChrGlsi03	80655244	80660597	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi03g1906	1	510	Xyloglucan Fucosyltransferase1	AT3G19280	64.603	0.0	683