Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0737 ATGTTGGGTAACCGTGAGAAAATGGTAGTCATCTCACCCAAGACTAACGAATGGCCACAGAGCCAGGTAGATGATCAAAAGGTTTCGATGGCTTCCTCTGGTAGGGTAATGGAAAAACCAGGTCAAGAGCTTCTACAGCAGCAACAAGAAGCCTTTAAGTGCCCTCGCTGTGATTCGTCAAACACCAAGTTCTGCTACTACAACAACTACAGTTTGTCTCAGCCTAGGCACTTCTGCAAAGCCTGCAAGCGATATTGGACAAGAGGTGGAACCCTGAGGAATGTTCCTGTAGGCGGCGGTTGCAGAAAAAACAAGCGTGTGAAGCGGCCAGCCACCTCCGCCATGGACACTGCTCCTTCGTCTTCTTCGGCTCTTACCGCCAATTCAAACCCTTCTTCCCAAGCCCAGATCGATATTGCCTCAACCTCGAGTCATATCAATCCTTTATTTTATGGGTTACCCAGTAACTCTTGTGATATGAGTCTTCCATTTCCAAAGTTCAATTCCAGAGTCTCCAGCGTAGACACTGTTTCTGGATATGATCTTCAGCCTCAGATGAATGCCCTTGGGTTAGATTTTCCATCTGGGATTCTGTCCAGTGAAGCTAGTGTCAATAATTACCGAAATGGGTTTTATTTAAATAATACACTTCTTTCAAGCTATAATTCGATCTTCGGTTCTTCTTCAACATCTCCACCCACTTCTCAGATTATGACTTTCCTTCTCAACTCTACTTTGCAGCAACAAAAATTCGTCACTGGTGGTGAGGCAGAGATGGTTGCTTTAAAAGAAGCGAAATCAGATGAAGGACAAAACAGGTTAGGGTGGAATGGTATTTGGCACAACCCCGAGCTTGTGGGCTTGTCCGATCCTCCACTTTATTGGAACGCAGGAAATGCTATGTGTGCTTGGAGTGATCAAACTAATATTGGCCCTTCAGTCACTTCTCTGATCTAG 957 0.4525 MLGNREKMVVISPKTNEWPQSQVDDQKVSMASSGRVMEKPGQELLQQQQEAFKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPATSAMDTAPSSSSALTANSNPSSQAQIDIASTSSHINPLFYGLPSNSCDMSLPFPKFNSRVSSVDTVSGYDLQPQMNALGLDFPSGILSSEASVNNYRNGFYLNNTLLSSYNSIFGSSSTSPPTSQIMTFLLNSTLQQQKFVTGGEAEMVALKEAKSDEGQNRLGWNGIWHNPELVGLSDPPLYWNAGNAMCAWSDQTNIGPSVTSLI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0737 318 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Glsi03g0737 318 Pfam Dof domain, zinc finger 50 106 IPR003851 GO:0003677|GO:0006355
Glsi03g0737 318 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Glsi03g0737 318 MobiDBLite consensus disorder prediction 114 134 - -
Glsi03g0737 318 MobiDBLite consensus disorder prediction 101 134 - -
Glsi03g0737 318 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 249 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0737 Glsi-ChrGlsi03 27295190 27296366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0737 1 318 C2C2-Dof Transcription Factor Family AT1G28310 40.510 6.78e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi03g0737 zf-Dof 3.5e-33 No_clan