Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2524 ATGTTTGAGACTTCTGCCTCCCAACCTTCTCTTTATGATCAGGCAAGTATTGGGACATCTGAATTTTCCCAGGCCTCCATTGTACCTACAAATGATCCCCGCTTAGACAGTCTTTCTGCATCAGGGGTCAGATTGTTGCCGTCCTTGGGGTTCAATATCATTAGGCCAGCTTCAATCTCATTGACTCCCCATGATAACACGCCAAACCAGCAACAGAGTAAGAACCAGTCAAGTGTCATGCAGAGCATATCTATTCCTCAGCTTCTATTCAGTCAATGCATTATGTTACTCAGAAAGGTTGGGCCAGATGTAGTAGCATCATTTCCAGTAATAACTGTGAGTAACATGATCCGAGAAGAGATGCCCATGATCCAAGAAATAGGAGTCGACGATGGAGATGTTTATCGTCATCGTGAGAGAGACATTCTTTCACAAAATGCTTGCTCTTCCCATGTGACTCTTCCTTGTACTAGAGAACAGCAGAGGTTAGGGATGATGGAGAGAGGGTGGAAGCCTAATAGTGAGATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAACACCAAGTTCTGCTACTACAACAACTACAGCTTAACTCAACCACGCTACTTTTGCAAAGGCTGCAGACGCTACTGGACCAAAGGAGGATCCCTCCGTAATGTCCCTGTTGGTGGTGGCTGCAGGAAAAACAGACGCGGTAATAAGACTTTCACACAATCATCCACTCATGCCCTCCCTTCAAAAGTACCTTATGGACCTATTGCCCATTCTTATGATCCCACAAAGAGTGCATATGCATCTTCTAGTTCCTCCGATGCTCCAAATATTGATCTTGCACTAGTTTATGCAAATTTCCTCAATCAAAAGCCAGATTCAAGAGCAGGGCTTGAGAATATGCCAGATCAAACGCAAACAGTTTTTGATCCTTCCCTAGAGTATTCGAGTCTATACAACGCGCTAGTTGGCCCAAGTGTTACTTTTCCAGAAGAACTTGGCCTTACGGCTGGGTGTTTGAATCTCTCTGAACAATCCCATTTCAGTGAGGGTAATGAAAAGTATTTTGGAGGGTTCAACTCCATGCAGGAAGATAGAATTGAGCAATGTAGTAGTCACGATACTATCAATTTTGATCTTCCACCATTACCAGGTGAAGAGGCAGCCTCACATGATATGATGTGGTCCGATTCTGAGATGATGGTAAACCATGCCTTGCAAGCGCCACAACCCCCAGTTCTTGGACCTCAACCTCATGATGCGGACTTGTTAATGGGTAATTGGGGCCCCTTTGATTCGCTAAGGGATGCTTCTTTTCCCAGGCCTTGA 1323 0.449 MFETSASQPSLYDQASIGTSEFSQASIVPTNDPRLDSLSASGVRLLPSLGFNIIRPASISLTPHDNTPNQQQSKNQSSVMQSISIPQLLFSQCIMLLRKVGPDVVASFPVITVSNMIREEMPMIQEIGVDDGDVYRHRERDILSQNACSSHVTLPCTREQQRLGMMERGWKPNSEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTFTQSSTHALPSKVPYGPIAHSYDPTKSAYASSSSSDAPNIDLALVYANFLNQKPDSRAGLENMPDQTQTVFDPSLEYSSLYNALVGPSVTFPEELGLTAGCLNLSEQSHFSEGNEKYFGGFNSMQEDRIEQCSSHDTINFDLPPLPGEEAASHDMMWSDSEMMVNHALQAPQPPVLGPQPHDADLLMGNWGPFDSLRDASFPRP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2524 440 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 165 339 IPR045174 GO:0003700|GO:0006355
Glsi02g2524 440 ProSitePatterns Zinc finger Dof-type signature. 180 216 IPR003851 GO:0003677|GO:0006355
Glsi02g2524 440 Pfam Dof domain, zinc finger 179 232 IPR003851 GO:0003677|GO:0006355
Glsi02g2524 440 ProSiteProfiles Zinc finger Dof-type profile. 178 232 IPR003851 GO:0003677|GO:0006355
Glsi02g2524 440 MobiDBLite consensus disorder prediction 232 246 - -
Glsi02g2524 440 MobiDBLite consensus disorder prediction 226 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2524 Glsi-ChrGlsi02 75087636 75092137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2524 170 435 C2C2-Dof Transcription Factor Family AT3G52440 41.404 2.76e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi02g2524 zf-Dof 8.2e-31 No_clan