Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0704 ATGGGTGAGTGTGATCAAATCGAACCGTTAGTTTTTGTCACTGAAGATTTAATCAAAGCTGAGATAAGCACTGGGTTAAGGGCCAGCAGAGAGACAGTGCCAACCCTTCCTCCTCTTTCTGATACACTGCTCACAAGAGAACGCCTGGTGGAAACCGCTGTTATCCCCCATCCCAGCTGGGATTTGCTTTGTGAATGGGTTTCTCTTCTCTGCACGTCTGCATGGAATCATCAGATCACTGGCTGCAGGTATATATGCCATGCATTTGAAAATGGCACAATTCAGGAGGAATCTGGAATGGATTCATCTTCTCCATCGGGGGATATGCTTACATGCTCTAGGCCCTTGATAGATCAGAGGAGGCTTATAAGATCCCCGCATGACCCAGCTCAAAAGTGCCCCAGGTGTGATTCGACCCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCCCAGCCAAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACCAAAGGAGGCACTCTCAGAAACATCCCTGTTGGCGGTGGTTGCAGAAAGAACAAGAAAGTTTCTGCCAAGAAATCCAACGACCAGCCACAGCCAGGACCCTCCTATCACCACAACCCCAAAGATATTCAGCTTTCATCTTTCCCAGATCATATGCAATTTTCCCACCCCAATAATTTACTTGGAACTAATATCGGGGCACTGGGAAACCCTGATTTTATGGAGAGCAAGTATAACATTGGTATGGTCGAGAACCCTAGGCCAATTGAGTTCATGGAAGGTAAGTTTGAAGGTATAATTGGAAGTAGTTCTAGGAATTTTGATGTCATGGGAAATAGTGATATGGGAATGGTTATAAATGGCCACAATGGGTACGGCATTTGCTCTCCAGCATTTGGGGGCATTGATGGCAACAACAGTGGGACTTACACAATGGACTCTTGCCAGCGACTCTTGCTGCCATATGATGCCAATGTGGTCCAAAATGCTTCAATTCATGATGTGAAGCCAAACCCTAAGCTATTATCCCTTGAATGGCAAGACCAGGGTTGTTCTGATGCTGGGAAAGAGTCATTTGGGTATATCAACGGTCTAGGATCATGGACTGGCATGATGAACGGCTATGGATCGTCCACAACAAACCCTTTGGTCTAA 1149 0.4621 MGECDQIEPLVFVTEDLIKAEISTGLRASRETVPTLPPLSDTLLTRERLVETAVIPHPSWDLLCEWVSLLCTSAWNHQITGCRYICHAFENGTIQEESGMDSSSPSGDMLTCSRPLIDQRRLIRSPHDPAQKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDQPQPGPSYHHNPKDIQLSSFPDHMQFSHPNNLLGTNIGALGNPDFMESKYNIGMVENPRPIEFMEGKFEGIIGSSSRNFDVMGNSDMGMVINGHNGYGICSPAFGGIDGNNSGTYTMDSCQRLLLPYDANVVQNASIHDVKPNPKLLSLEWQDQGCSDAGKESFGYINGLGSWTGMMNGYGSSTTNPLV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0704 382 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 121 210 IPR045174 GO:0003700|GO:0006355
Glsi02g0704 382 MobiDBLite consensus disorder prediction 190 207 - -
Glsi02g0704 382 ProSiteProfiles Zinc finger Dof-type profile. 131 185 IPR003851 GO:0003677|GO:0006355
Glsi02g0704 382 ProSitePatterns Zinc finger Dof-type signature. 133 169 IPR003851 GO:0003677|GO:0006355
Glsi02g0704 382 MobiDBLite consensus disorder prediction 181 207 - -
Glsi02g0704 382 Pfam Dof domain, zinc finger 130 185 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0704 Glsi-ChrGlsi02 4596755 4598262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0704 116 382 C2C2-Dof Transcription Factor Family AT5G62940 42.988 8.23e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi02g0704 zf-Dof 9.1e-33 No_clan