Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0702 ATGGAATCATCAGATCACTGGCTGCAGGGCACAATTCAGGAGGAATCTGGAATGGATTCATCTTCTCCATCGGGGGATATGCTTACATGCTCTAGGCCCTTGATAGATCAGAGGAGGCTTATAAGATCCCCGCATGACCCAGCTCAAAAGTGCCCCAGGTGTGATTCGACCCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCCCAGCCAAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACCAAAGGAGGAACTCTCAGAAACATCCCTGTTGGTGGTGGTTGCCGAAAGAACAAGAAAGTTTCTGCCAAGAAATCCAACGACCAGCCACAGCCAGGACCCTCCTATCACCACAACCCCCAAGATATTCAACTTTCATCTTTCCCAGATCATATGCCATTTTCCCACCCCAATAATTTACTTGGAACTAATATTGGGGCAGTGGGAAACCCTGATTTTATGGAGAGCAAGTATAACATTGGTATGGTCGAGAACCCTAGGCCAATTGAGTTCATGGAAGGTAAGTTTGAAGGTATAATTGGAAGTAGTTCTAGGAATTTTGATGTCATGGGAAATAGTGATATGGGCATGGTTATAAATGGCCACAATGGGTACGGCATTTGCTCTCCAGCATTTGGGGGCATTGATGGCAACAACAGTGGGACTTACACAATGGACTCTTGCCAGCGACTCTTGCTGCCATATGATGCCAATGTGGTCCAAAATGCTTCAATTCATGATGTGAAGCCAAACCCTAAGCTATTATCCCTTGAATGGCAAGACCAGGGTTGTTCTGATGCTGGGAAAGAGTCATTTGGGTATATCAACGGTCTAGGATCATGGACTGGCATGATGAACGGCTATGGATCGTCCACAACAAACCCTTTGGTCTAA 903 0.4618 MESSDHWLQGTIQEESGMDSSSPSGDMLTCSRPLIDQRRLIRSPHDPAQKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDQPQPGPSYHHNPQDIQLSSFPDHMPFSHPNNLLGTNIGAVGNPDFMESKYNIGMVENPRPIEFMEGKFEGIIGSSSRNFDVMGNSDMGMVINGHNGYGICSPAFGGIDGNNSGTYTMDSCQRLLLPYDANVVQNASIHDVKPNPKLLSLEWQDQGCSDAGKESFGYINGLGSWTGMMNGYGSSTTNPLV 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0702 300 MobiDBLite consensus disorder prediction 108 132 - -
Glsi02g0702 300 MobiDBLite consensus disorder prediction 94 132 - -
Glsi02g0702 300 MobiDBLite consensus disorder prediction 1 29 - -
Glsi02g0702 300 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Glsi02g0702 300 Pfam Dof domain, zinc finger 48 103 IPR003851 GO:0003677|GO:0006355
Glsi02g0702 300 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Glsi02g0702 300 MobiDBLite consensus disorder prediction 1 28 - -
Glsi02g0702 300 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 127 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0702 Glsi-ChrGlsi02 4569844 4570958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0702 7 300 C2C2-Dof Transcription Factor Family AT5G62940 42.513 5.71e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi02g0702 zf-Dof 6.3e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0702 02 4569844 4570958 Glsi13g1292 13 30345387 30348068 PCT