Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1170 ATGTCGCCAAAGCCCGTTAACACTGTCGCCGTCACAGTCATACTGTGTTTCAGTTTCTTTATCCTCTTCTTCTCTGGTTTCCTGGAGTTTCCCTCTGTATCATCCTCTTTTCAACCCGTCAACGATCCCATAACGTCAGAGGCCAAAAGCACCCCAGAATCCTTCACGGATCTGGTGGGTGCCTTCAGGAGATGGGACTCTCAAGTGGGTTGTCCCAGGTTCAAGGATAAACATAATGGAATGAAACTTAACAAGTCAAAGGATTCTCCTTTGCAAGAGATTGGGGGTGAATCGGAATGTGGTGGTTTAAAATTAAGCCATATTAGCGTTTTGGTCAAAGGGTGGACTTGGATTCCCGATAATTTAGATAATTTGTACTCTTGCCGATGTGGGTTGAGCTGTTTATGGACTAAATCTTCAGTTCTGGCGGACAAACCTGATGCGTTGTTGTTTGAAACCACCACGCCTCCACTACGGAGACGCATGGGACAACCTCTTCGTGTATACTTGGATCTTGAAGCTGGCAGAAGGCGATCAGGCCGAGAGGATATATATATTAGTTATCATGCTGAAGATGATGTACAGTCAACTTATGCTGGTTCTCTGTTTCACAATGGCCGAAATTATCACATCTCCTCTCGAAAAAACAATGATACACTTGTTTATTGGTCTTCATCACGGTGTCTTTCTCAAAGGAATGAACTTGCCAAGAAACTCATCAGCTTGCTGCCACACCATTCATTTGGCAAGTGCCTTAATAATGTTGGTGGTCTAGACATGGCTCTATCCTTTTACCCTGAGTGTGCAAACGATGCCAGTGTTACCCCAAAATGGTGGGATCATCTGCATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAATACTTGGACTGAGAGTTACGTGACAGAGAAGTTATTTTATGCCCTAGACTCTGGTGCGGTTCCAATCTATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCACATTCAATAATAGACGGTACAAAGTTCAGCTCGATGGAAGAATTGGCTTCATATGTGAAATCCCTAGCTAATGACCCTGTAGCATATGCAGAATACCATGCTTGGAGAAGGTGTGGTATACTTGGTAATTATGGAAAAACTCGAGCACTGAGCCTTGACACTCTACCGTGTCGGTTATGTGAGGCTGTTAGCCGAAAAGGTGGAAGAAATTCAAGAATCTAG 1218 0.4376 MSPKPVNTVAVTVILCFSFFILFFSGFLEFPSVSSSFQPVNDPITSEAKSTPESFTDLVGAFRRWDSQVGCPRFKDKHNGMKLNKSKDSPLQEIGGESECGGLKLSHISVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSSVLADKPDALLFETTTPPLRRRMGQPLRVYLDLEAGRRRSGREDIYISYHAEDDVQSTYAGSLFHNGRNYHISSRKNNDTLVYWSSSRCLSQRNELAKKLISLLPHHSFGKCLNNVGGLDMALSFYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTWTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGTKFSSMEELASYVKSLANDPVAYAEYHAWRRCGILGNYGKTRALSLDTLPCRLCEAVSRKGGRNSRI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1170 405 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 98 397 - -
Glsi01g1170 405 FunFam Alpha-(1,4)-fucosyltransferase 167 373 - -
Glsi01g1170 405 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 116 397 IPR001503 GO:0006486|GO:0008417|GO:0016020
Glsi01g1170 405 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 217 399 IPR001503 GO:0006486|GO:0008417|GO:0016020
Glsi01g1170 405 PIRSF FucT_plant 1 405 IPR017177 -
Glsi01g1170 405 Gene3D - 172 371 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1170 Glsi-ChrGlsi01 62646741 62650029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1170 1 405 Xyloglucan Fucosyltransferase1 AT1G71990 68.148 0.0 603