Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00051 ATGCAGGAAAGTAGAGACCCTGCAATCACGCTCTTCGGTCGGAAGATTCCCCTTCCCGGCGATGGCTCTGACTCGCCGCTGGCCATCCATCTTAACGAAGAAGAAGAAGTAGGACAAGTTCCAATTGAGGAGAAAGACGAAGGAGACAAGGATTCTGGAGCTGAAAATGTTATTGAGAAAGAGCAAGAAGCTGAGCCTCCTTCAAATGAAGAAGAGATTAAGAATTCAGGCACATCGCCCGAGGCAATCGTGAACCCCGAAACACCTGGCATAGAAGAAGAAACTGTAAAATCAAAAAGTGACAAGTCAGAGAAGGAACAAAGCGATGTAGCCAACTCACAAGAGAAAACCCTGAAGAAGCCAGATAAAGTGATACCATGTCCCCGCTGCAATAGCATGGACACCAAATTCTGTTACTACAACAACTATAATGTCAACCAGCCACGTTATTTCTGCAAAGCATGTCAGAGATACTGGACTGCTGGTGGCACCATGAGGAATGTACCTGTGGGGGCAGGAAGACGAAAGAACAAGAACTCTGCCATGCATTATCGCCACATCACTATTACTGAGGCTCTTCAAGCATCTAGAATTGATGCTCCTAATGGAACTCATCTCCCCACGTTAAAAAGCAATGGTAGAGTCCTCAGCTTTGGATTAGATGCACCTATTTGTGATACCATGGCATCTGTCCTGAACCTTGGAGAGAAAAAGGTTCTTAATGGCACAAGAAATGGGCTTCATGGCTTTGAGGATCAAAGATTTCCCGTTCCTTGCAAAAGTGGGGAAAATGGTGATGACTGCTCAAATGCATCTTCCATTACGGTTTCGTGTTCCATGGGAGAAAGTAACAAAAGTACCTTCCATGAACCGTTGCTCCAAAACAATGGTTTCCTTCCTCAACTTCCATGCATTCCTAGTGTTCCTTGGCCTTATACTTGGAATTCTCCAGTTCCCTCACCTGCTCTGTGTCCTTCAGGATTTCCCATGTCATTCTATCCTGCTGCTTTTTGGAACTGCGGCATGCCAGGGAATTGGAATGTTCCATGGTTTCCCTCACATTCATCTGCTTCAAACCCCAAGTCTCCAAGCTCTGGTCCAGATTCTCCAACTTTGGGGAAGCACTTGAGGGATGATGACATGATTAAGCAAGACTCTCTGTGCAAAGAAGAACCACCAAAACAAAGAAACGGGTCTGTTTTGGTTCCCAAAACGTTAAGAATTGATGACCCAAGTGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATTAAGAATGAATCAGCCAGTGGGGGAGGTATGTTTAAGGCCTTCCAACCAACTAAGGATGAAAAGAATCACGTTGAAGCCTCTTCAGTGTTGCGGGCTAACCCTGCAGCTTTGTCTAGATCCCTTAATTTTCATGAGAATTCTTGA 1419 0.451 MQESRDPAITLFGRKIPLPGDGSDSPLAIHLNEEEEVGQVPIEEKDEGDKDSGAENVIEKEQEAEPPSNEEEIKNSGTSPEAIVNPETPGIEEETVKSKSDKSEKEQSDVANSQEKTLKKPDKVIPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAMHYRHITITEALQASRIDAPNGTHLPTLKSNGRVLSFGLDAPICDTMASVLNLGEKKVLNGTRNGLHGFEDQRFPVPCKSGENGDDCSNASSITVSCSMGESNKSTFHEPLLQNNGFLPQLPCIPSVPWPYTWNSPVPSPALCPSGFPMSFYPAAFWNCGMPGNWNVPWFPSHSSASNPKSPSSGPDSPTLGKHLRDDDMIKQDSLCKEEPPKQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFQPTKDEKNHVEASSVLRANPAALSRSLNFHENS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00051 472 MobiDBLite consensus disorder prediction 1 117 - -
Gabi4573g00051 472 MobiDBLite consensus disorder prediction 354 376 - -
Gabi4573g00051 472 Pfam Dof domain, zinc finger 122 179 IPR003851 GO:0003677|GO:0006355
Gabi4573g00051 472 ProSiteProfiles Zinc finger Dof-type profile. 125 179 IPR003851 GO:0003677|GO:0006355
Gabi4573g00051 472 PANTHER CYCLIC DOF FACTOR 2 1 472 IPR045174 GO:0003700|GO:0006355
Gabi4573g00051 472 ProSitePatterns Zinc finger Dof-type signature. 127 163 IPR003851 GO:0003677|GO:0006355
Gabi4573g00051 472 MobiDBLite consensus disorder prediction 43 70 - -
Gabi4573g00051 472 MobiDBLite consensus disorder prediction 92 117 - -
Gabi4573g00051 472 MobiDBLite consensus disorder prediction 354 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00051 Gabi-Chr4573 431640 434782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00051 1 470 C2C2-Dof Transcription Factor Family AT3G47500 48.247 4.38e-125 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi4573g00051 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00051 - - gmx:778113 732.635