Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4267g00010 ATGCATGGTTGTCTTGCAGAATGCATGTTAGACTTTCAAAAACATTTGGCTGATAATTATGCAGCGGTATTGTATTTGGCCCACTTTGTTATGGCTTTTTATTTTTATTTTTTATTTTTTCAGAGACACAAGGGAGAACCGCTTCGCGTATACATGGATCTCGAAGCTGGCCGAAAGAGATCAGGCCGAGAGGATATATATATTAGTTATCATGCTGAAGATGATGTACAGTCAACCTATGCTGGTACTCTGTTTCACAACAGTCGTAACTATTACATCTCCAACAAGAAAAACAACGAGAAACTTGTTTATTGGTCTTCATCACGATGTCTTTCTCAAAGGGATGAACTTGCAAAGAAGTTCCTTGGCTTGGTGCCGCATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGATCAAACGTGGCTCTTTCTTTCTATCCAGAATGTGCATATGATGCCAACGTTGAACCGAAATGGTGGGATCATATACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTACTGAAAGTTACGTGACGGAGAAGTTATTTTATGCCTTGGACTCCGGTGCAGTTCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATCATAGATGGTAGTAAATTCAGCTCGTTGGAAGAATTGGCTACATACGTGAAGGCCGTGGCTAATGACCCATTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTATTGGGTAACTATGGAAAAACCCGAGCAATGAGCCTTGATACATTGCCATGCAGGTTATGTGAGGCTGTTAGCAGAAAAGGTGGTAGAAGTGCAAGAAGCTAG 864 0.412 MHGCLAECMLDFQKHLADNYAAVLYLAHFVMAFYFYFLFFQRHKGEPLRVYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGTLFHNSRNYYISNKKNNEKLVYWSSSRCLSQRDELAKKFLGLVPHHSFGKCLNNVGGSNVALSFYPECAYDANVEPKWWDHIHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGSKFSSLEELATYVKAVANDPLAYAEYHAWRRCGVLGNYGKTRAMSLDTLPCRLCEAVSRKGGRSARS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4267g00010 287 Gene3D - 47 254 IPR038577 -
Gabi4267g00010 287 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 279 - -
Gabi4267g00010 287 FunFam Alpha-(1,4)-fucosyltransferase 49 255 - -
Gabi4267g00010 287 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 7 279 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gabi4267g00010 287 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 98 280 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4267g00010 Gabi-Chr4267 79000 80694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4267g00010 4 285 Xyloglucan Fucosyltransferase1 AT1G71990 69.504 2.72e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4267g00010 K14412 - gmx:100792300 468.388