Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi4267g00009 | ATGGATCTCGAAGCTGGCCGAAAGAGATCAGGCCGAGAGGATATATATATTAGTTATCATGCTGAAGATGATGTACAGTCAACCTATGCTGGTACTCTGTTTCACAACAGTCGTAACTATTACATCTCCAACAAGAAAAACAACGAGAAACTTGTTTATTGGTCTTCATCACGATGTCTTTCTCAAAGGGATGAACTTGCAAAGAAGTTCCTTGGCTTGGTGCCGCATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGATCAAACGTGGCTCTTTCTTTCTATCCAGAATGTGCATATGATGCCAACGTTGAACCGAAATGGTGGGATCATATACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTACTGAAAGTTACGTGACGGAGAAGTTATTTTATGCCTTGGACTCCGGTGCAGTTCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATCATAGATGGTAGTAAATTCAGCTCGTTGGAAGAATTGGCTACATACGTGAAGGCCGTGGCTAATGACCCATTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTATTGGGTAACTATGGAAAAACCCGAGCAATGAGCCTTGATACATTGCCATGCAGGTTATGTGAGGCTGTTAGCAGAAAAGGTGGTAGAAGTGCAAGAAGCTAG | 711 | 0.4233 | MDLEAGRKRSGREDIYISYHAEDDVQSTYAGTLFHNSRNYYISNKKNNEKLVYWSSSRCLSQRDELAKKFLGLVPHHSFGKCLNNVGGSNVALSFYPECAYDANVEPKWWDHIHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGSKFSSLEELATYVKAVANDPLAYAEYHAWRRCGVLGNYGKTRAMSLDTLPCRLCEAVSRKGGRSARS | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi4267g00009 | 236 | Gene3D | - | 6 | 203 | IPR038577 | - | |
| Gabi4267g00009 | 236 | FunFam | Alpha-(1,4)-fucosyltransferase | 1 | 204 | - | - | |
| Gabi4267g00009 | 236 | Pfam | Glycosyltransferase family 10 (fucosyltransferase) C-term | 47 | 230 | IPR001503 | GO:0006486|GO:0008417|GO:0016020 | |
| Gabi4267g00009 | 236 | PANTHER | ALPHA- 1,3 -FUCOSYLTRANSFERASE | 10 | 228 | IPR001503 | GO:0006486|GO:0008417|GO:0016020 | |
| Gabi4267g00009 | 236 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 13 | 228 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi4267g00009 | Gabi-Chr4267 | 79000 | 80702 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi4267g00009 | 1 | 234 | Xyloglucan Fucosyltransferase1 | AT1G71990 | 76.923 | 4.06e-140 | 397 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi4267g00009 | K14412 | - | gmx:100792300 | 447.203 |