Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4267g00004 ATGGATCTCGAAGCTGGCCGAAAGAGATCAGGACGAAAGGATATATATATTAGTTATCATGCTGAAGATGATGTACAGTCAACATATGCTGGTACTCTATTTCACAACAGTCGTAACTATTACATCTCCAACAAGAAAAACAACGAGAAACTTGTTTATTGGTTTTCATCACGATGTCTTTCTCAAATGGTCATACTTGCAAAGAAGTTCCTTGGCTTGGTGCCGCATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGATCAAACGTGGCTCTTTCTTTCTATCCAGAATGTGCATATGATGCCAACGTTGAACCGAAATGGTGGGATCATATCCATTTTGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTACTGAAAGTTACGTGACAGAGAAGTTATTTTATGCCTTGGACTCCGGTGCAGTTCCCATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCATATTCAATCATAGATGGTAGAAAATTCAGGTCGTTGAAAGAATTGGCTACATACGTGAAGGCCGTAGCTAATGATCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTATTGGGTAACTATGGAAAAACCCGAGCAATGAGCCTTGACACATTGCCATGTCGGTTATGTGAGGCTGTTAGCAGAAAAGGTGGTAGAAATGCAAGAAGCTAG 711 0.4107 MDLEAGRKRSGRKDIYISYHAEDDVQSTYAGTLFHNSRNYYISNKKNNEKLVYWFSSRCLSQMVILAKKFLGLVPHHSFGKCLNNVGGSNVALSFYPECAYDANVEPKWWDHIHFAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPYSIIDGRKFRSLKELATYVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAMSLDTLPCRLCEAVSRKGGRNARS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4267g00004 236 Gene3D - 6 203 IPR038577 -
Gabi4267g00004 236 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 47 230 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gabi4267g00004 236 FunFam Alpha-(1,4)-fucosyltransferase 1 204 - -
Gabi4267g00004 236 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 14 228 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gabi4267g00004 236 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 14 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4267g00004 Gabi-Chr4267 43520 46470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4267g00004 1 234 Xyloglucan Fucosyltransferase1 AT1G71990 74.786 9.38e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4267g00004 K14412 - gmx:100792300 433.335