Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00036 ATGCCTGGAATCTTGGAAGAACGACCTCATACACTAATATCAGATATTGGTCCAAAGAATCATTCATTTGAAGATCAGAAGAATGACTCATCCCTGTTTACTACTAGCATTGCTAATGACAAGCTCCTTGATGGACTTTTAGTTTCCACATTTGATGAAGCATCATGCTTAAGTAGGTATCGATCTTACTTATACCGCAAAGCTTCCCCTCATAAACCTTCTGTACATCTGATATCAAAGCTACGAAACTATGAACACCTTCATAGAAGTTGTGGACCTCATACCAAATCCTACAACAAAATCATGAGAAAGGGTGCAAACTCTAGCAAAAAAGGTGCAGGTACAATGTGCAAGTACCTTGTCTGGACAGCTTCCAATGGCTTAGGGAACAGGATGGTAACCTTGGCTTCAGCATTCCTTTATGCTATCCTCACGGACCGTGTTCTACTTGTCAGATTTGGGTCTGATATGTTTGGTCTCTTTTGCGAGCCATTTCCTGATTCCTCATGGTTATTGCCTAGGGATTTTCCTTATTGGAAAGATCGGAAACACATTGATACGTATGAAAGTGTGCTCACGAATGAGAAGACAAACGGTTCACAGGAGCTTTTGCCATCATTTCTTATTCTTAATCTACAACACACGCATGATGGTCACAATAACTTCTTTCATTGTGATCAAAGTCAAGATCTTCTCCAGAAAGTCCCTGTCCTGATTTTGTTGTCGGATCAATACTTTGTCCCCTCTCTTTTTATGGTTCCATCATTTAGACTAGATCTAAGCAAAATGTTCCCTGAAAAGGACACTGTTTTTCACCATCTGGGACGTTACCTTTTTCACCCATCAAATGAGGCATGGGAACTAATTAGCAGTTTCTATGAGGCGCACTTAGCCAAGGCAGATGAGAGGATTGGCCTGCAGATTAGAGTATTTAATACTCATCGAGCACCACATCAAACTATTATCAATGAAATTATAGCCTGCACAGTTCAGCATAAGCTGCTACCTGAATTAGGCATGCAAAGTTCGGCAACTTCTCCTTTGAAGAAGCAGACATCGAAAGCTGTTCTAGTAGCATCTTTATACTCAGAATATGGTGAGAAGCTGAGGACTATGTATCTGGCAAATACAACTGCGACCAAGGAAGTGATAAGAGTTTATCAGCCTAGTCATGAACAGCGTCAAAAGTCGAATAATGACATGCACAACATTAAGGCATGGTCCGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCAAAGTCTTGGAGGTTTGAAACCATGGATTCTGAAGAGGGCATATGGGGAAACCATCCCAAATCCACCTTGTCAACGAGCCATGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGCCAACAGCAAAGTTGATTTTACTTCCCTTTTCCATCACATGAAGCATTGTGAAGACGTAACTAGTGGATTGAGGCTGGTTAATGCTAATCGCTAG 1518 0.413 MPGILEERPHTLISDIGPKNHSFEDQKNDSSLFTTSIANDKLLDGLLVSTFDEASCLSRYRSYLYRKASPHKPSVHLISKLRNYEHLHRSCGPHTKSYNKIMRKGANSSKKGAGTMCKYLVWTASNGLGNRMVTLASAFLYAILTDRVLLVRFGSDMFGLFCEPFPDSSWLLPRDFPYWKDRKHIDTYESVLTNEKTNGSQELLPSFLILNLQHTHDGHNNFFHCDQSQDLLQKVPVLILLSDQYFVPSLFMVPSFRLDLSKMFPEKDTVFHHLGRYLFHPSNEAWELISSFYEAHLAKADERIGLQIRVFNTHRAPHQTIINEIIACTVQHKLLPELGMQSSATSPLKKQTSKAVLVASLYSEYGEKLRTMYLANTTATKEVIRVYQPSHEQRQKSNNDMHNIKAWSEIYLLSLCDALVTSPKSTFGYVAQSLGGLKPWILKRAYGETIPNPPCQRAMSMEPCFHYPPKYDCRANSKVDFTSLFHHMKHCEDVTSGLRLVNANR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00036 505 PANTHER FUCOSYLTRANSFERASE 2-RELATED 24 502 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gabi3302g00036 505 Gene3D - 287 440 - -
Gabi3302g00036 505 Gene3D - 115 167 - -
Gabi3302g00036 505 FunFam Galactoside 2-alpha-L-fucosyltransferase 115 166 - -
Gabi3302g00036 505 Pfam Xyloglucan fucosyltransferase 37 474 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gabi3302g00036 505 FunFam Galactoside 2-alpha-L-fucosyltransferase 287 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00036 Gabi-Chr3302 353910 357112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00036 29 501 Xyloglucan Fucosyltransferase1 AT2G03220 51.875 6.87e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00036 K13681 - gmx:100799776 869.766