Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00032 ATGGAGCAAGAAGGAGAAGTTAGAGATGGTGGAGAAGGAAGACAAGAGAGTAAACAACCTCTTCCTCTACCACAACAACCACTGCAGCACCAGAAATGCCCACGCTGCAATTCTCAGAACACCAAGTTCTGCTATTACAACAATTATAACTTGTCTCAGCCTCGATACTTTTGCAAAACATGTAGAAGGTACTGGACACAAGGTGGAACCTTTAGGAACATACCAGTTGGTGGTGGTTCCCGTAAGGACAAGCGTGGCAAAAATTCTTCATCTTCCACGTCACAGCCGCAACTGGTCCAAAACAAACCATCTCCACCCATAGTGGTTCAGTCAACTAGCTCCTGTTATCAACGTAGTGATGGTGGTGGTGGGTATTTTTCTTCTCTGAACCCATCACAACCTTTGGCTCAGTCTCTGAGAGTTGATGGTGATGTTGTGGGTTCTTCTAATTCAACTCTTCTATCTAGCTTTAATGCTACTTTTCTTGATTCACAACATCATCACCCTAGCCAAGTTCCTTCATCGAGATTCTATCAAATGGGATACACAGATAGGGTAAAATTATCTATGTATCCTGCAGAACAAGTCTTAATTCGATCAAGCATGAGTCCTAACAGTGCTGCTTCTTCTCAACCTAATCATTGGCCACAAAGTTTCATCAATAATGTTAACCACAGGGCTTCTGATACCTCTTTGTGGAGTACTATTAGCACCGCTTCCATCAGTGGTAACTCTGATCAGAACAATATCAGAGGTTCTTCTTCTTTGATCCCAAATCATTGGCCTGATTTGTCTCGGTATGGCCCTCCTAAATAA 816 0.4277 MEQEGEVRDGGEGRQESKQPLPLPQQPLQHQKCPRCNSQNTKFCYYNNYNLSQPRYFCKTCRRYWTQGGTFRNIPVGGGSRKDKRGKNSSSSTSQPQLVQNKPSPPIVVQSTSSCYQRSDGGGGYFSSLNPSQPLAQSLRVDGDVVGSSNSTLLSSFNATFLDSQHHHPSQVPSSRFYQMGYTDRVKLSMYPAEQVLIRSSMSPNSAASSQPNHWPQSFINNVNHRASDTSLWSTISTASISGNSDQNNIRGSSSLIPNHWPDLSRYGPPK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00032 271 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Gabi3151g00032 271 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 202 IPR045174 GO:0003700|GO:0006355
Gabi3151g00032 271 MobiDBLite consensus disorder prediction 89 110 - -
Gabi3151g00032 271 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Gabi3151g00032 271 MobiDBLite consensus disorder prediction 1 15 - -
Gabi3151g00032 271 MobiDBLite consensus disorder prediction 243 271 - -
Gabi3151g00032 271 Pfam Dof domain, zinc finger 30 85 IPR003851 GO:0003677|GO:0006355
Gabi3151g00032 271 MobiDBLite consensus disorder prediction 1 32 - -
Gabi3151g00032 271 MobiDBLite consensus disorder prediction 243 260 - -
Gabi3151g00032 271 MobiDBLite consensus disorder prediction 72 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00032 Gabi-Chr3151 326830 327645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00032 24 156 C2C2-Dof Transcription Factor Family AT1G51700 52.593 1.08e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi3151g00032 zf-Dof 3.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00032 - - gmx:100814555 244.202