Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi289g00007 ATGTTGTTGAAGAGCACTTTCCTCCTCTTGTTACTTTTGCAGGCTTTGACAAATGGAAGCTGTAAATCCACCATAGAACCATGCACAAACTCAGATTCTTGCAATGCTCTACTTGGTTACACGCTTTACACAGACCTCCAAGTCTCAGAGGTGGCTTCACTCTTCCAAATCGACCCTATAGCTCTTCTCACCGCAAATGCCATTGACATCTCATACCCTGACGTGGAACACCATATCCTCCCTTCAAAACTGTTCCTTAAAATCCCAATCTCATGTTCTTGCGTTGATGGGATTCGCAAATCGGTTTCCACCCATTATAAAACGCGTCCTTCTGATACTCTATCGTCCATTGCGGATTCAGTATATGGGGGTTTGGTCTCTGCTGACCAGCTTAGTGAGGCTAATTCCATAGCTGACCCTTCAGTGTTGGAAGTTGGCCAGAGCCTTGAAGTTCCTCTTCCTTGCACTTGCTTCAATGGTTCTGATAACTCTTTGCCTGCAATTTACCTATCCTATGTTGTTCAACCGGTTGATACTTTGGCTGCAATTGCCGCCAGGTATTTCACTACTCTTACTGATTTGATGAATGTGAATGCCATGGGAAGCACAGCTATCAGTGATGGTGATATCCTTTCTATTCCAATACCCGCTTGTGCTTCAAAGTTTCCAAAATTTGCCTCTGATTCTGGGTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCACTGTGTGCAGTGTAGCTGTGGACCACGAGACCTGAATTTGTACTGTATGCCAGCTTCTCTGGCTGTTTCTTGCTCCAGTATGCAATGTAAAAATAGCAATCTTATGCTCGGGAATGTTACCGTGCAACAGAGTAGTGCGGGTTGCAATGTTACATCTTGCAGTTATGATGGTATTGTTAATGGCACCATAATAACAATGTTGTCCCCATCTCTTCAGCCTCGATGTCCAGGGCCACAGGAATTCCCTCCTCTGATTGCCCCACCTACATCTGTTAGGAGGGAGTCAGAATTTGCACCAGCGCCATCTCCGCAGTCAGATGGAGCTGGTCTTGTAACACCCAAGCCATCACTGGTGCCTGCATCAGGTCTTCCAGGATTCTCTCCTGCAAATGGTCCTATTAGTGGGATTTCTTCTGGTGCTTCTGCTGCATGCTCCTTGGTGAATCCATTACCCACTTTGATGTCTGCACTTGTGTTATTACTTGTCAAGTTGATGATCCCTGTGGCATTGTAA 1245 0.457 MLLKSTFLLLLLLQALTNGSCKSTIEPCTNSDSCNALLGYTLYTDLQVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSKLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSSIADSVYGGLVSADQLSEANSIADPSVLEVGQSLEVPLPCTCFNGSDNSLPAIYLSYVVQPVDTLAAIAARYFTTLTDLMNVNAMGSTAISDGDILSIPIPACASKFPKFASDSGLLVPNGSYAITAGHCVQCSCGPRDLNLYCMPASLAVSCSSMQCKNSNLMLGNVTVQQSSAGCNVTSCSYDGIVNGTIITMLSPSLQPRCPGPQEFPPLIAPPTSVRRESEFAPAPSPQSDGAGLVTPKPSLVPASGLPGFSPANGPISGISSGASAACSLVNPLPTLMSALVLLLVKLMIPVAL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi289g00007 414 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 323 - -
Gabi289g00007 414 MobiDBLite consensus disorder prediction 336 358 - -
Gabi289g00007 414 Pfam LysM domain 106 152 IPR018392 -
Gabi289g00007 414 Pfam LysM domain 172 214 IPR018392 -
Gabi289g00007 414 Gene3D LysM domain 161 222 IPR036779 -
Gabi289g00007 414 CDD LysM 104 151 IPR018392 -
Gabi289g00007 414 ProSiteProfiles LysM domain profile. 104 151 IPR018392 -
Gabi289g00007 414 SMART LysM_2 105 152 IPR018392 -
Gabi289g00007 414 SMART LysM_2 171 214 IPR018392 -
Gabi289g00007 414 ProSiteProfiles LysM domain profile. 170 213 IPR018392 -
Gabi289g00007 414 CDD LysM 171 213 IPR018392 -
Gabi289g00007 414 Gene3D LysM domain 100 160 IPR036779 -
Gabi289g00007 414 SUPERFAMILY LysM domain 170 215 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi289g00007 Gabi-Chr289 47812 50676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi289g00007 7 389 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.801 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi289g00007 - - gmx:100808966 664.84