Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2734g00003 ATGCTGGAAACTAAGGACCCTGCAATTAAGCTCTTCGGCCAGAAGATTCCCTTTCCTGGGGAACCTGAGGCTCCTGTCATTGCCGGCGACGACAAGGCCTTGCCGGCGGCGATGGATGTCGACAAAGAGGAAGAAGAAGACAGAGACGTTGATGAGTCAGAACATGAAGATGAGAAAGACCATGGAGACAAGGATTCTCGAGCTGAAGAAGAAGTTACTAAGAAAAAGAAAGATGCTGATCCTCCTCCAAATGCTGCAGAGACTAAGAAGAATTCCGGAACATTACTGCCTGAGGGTATTCAGAACCCAAAGACACCTTCAATAGAAGAAGAAACTGCAAAATCACAAGATGGCAAATCAGAGAACGAGCAAAGTGATGCAACCAACAACTCACAAGAGAAAACACTGAAGAAGCCAGATAAAATACTTCCATGTCCACGCTGCAATAGCATGGACACTAAATTCTGTTACTACAACAATTACAACATCAATCAGCCACGTTATTTCTGCAAAGCGTGTCAAAGATACTGGACTGCTGGTGGTACCATGCGGAATGTGCCAGTGGGTGCAGGGAGAAGAAAGAACAAGAATTCTTCCACCCATTATCGCCATATCACCATCTCTGAGGCTCTTCAGGGAGCTAGAATTGATGCTACTAATGGAACTCATCTTCCCACTTTAAAAACCAATGGTAGAGTCCTTAGCTTTGGATTAGACCCACCGATTTGTGATTCCATGGCATCCCTCTTGAACCTTGCGGAGAAAAAGGTTCTTAATGGCACAAGAAATGGGTTTCATAACATTGAGGATCAAAGAATTGCTGTTCCTTGCAAAAGTGAGGAAAATGGTGATGACTGCTCAAGTGGGTCTTCCATTACTGTTTCAAATTCCATGGAGGAAAGTGGGAAAAGCACTTCCCAAGAATCATTATTAAGAAACAATGGTTTCATTCCTCAAGTTCCATGCTTTTCCAGTGTTCCTTGGCCTTATCCTTGGAACTCTCCAGTTCCTTCACATGCTTTGTGTCCTCAAGGATTTCCCCCCATGTCATTCTATCCTGCGGCGGCTTTTTGGAACTATGGTGTACCAGGGAATTGGAATACTCCATGGTTTCCCTCTCATGATGCATCTGTTCCAAACCCAAGCTCTCCAAGCTCAGGTGCAAATTCTCCTACTCTTGGAAAACACTCCAGGGATGATGACATGGTTAAACAAGACCATTTGCGCAATGAAGAACCATCAAGACATAGAAACGGGTGTGTTTTGGTCCCCAAGACTTTAAGAATTGATGACCCGAGTGAAGCTGCAAAGAGTTCTATATGGTCAACTCTAGGAATTAAGAATGAATATGTGAGTGGGGGAGGCATGTTTAATGCCTTTCAATCAAAGAAGGACGAAAAGAATCATGTTGAAACCTCCCCATTGTTGCGGGCTAACCCTGCAGCTTGGTCTAGATCCCTTAATTTTCATGAGAACTGCTGA 1482 0.4413 MLETKDPAIKLFGQKIPFPGEPEAPVIAGDDKALPAAMDVDKEEEEDRDVDESEHEDEKDHGDKDSRAEEEVTKKKKDADPPPNAAETKKNSGTLLPEGIQNPKTPSIEEETAKSQDGKSENEQSDATNNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSTHYRHITISEALQGARIDATNGTHLPTLKTNGRVLSFGLDPPICDSMASLLNLAEKKVLNGTRNGFHNIEDQRIAVPCKSEENGDDCSSGSSITVSNSMEESGKSTSQESLLRNNGFIPQVPCFSSVPWPYPWNSPVPSHALCPQGFPPMSFYPAAAFWNYGVPGNWNTPWFPSHDASVPNPSSPSSGANSPTLGKHSRDDDMVKQDHLRNEEPSRHRNGCVLVPKTLRIDDPSEAAKSSIWSTLGIKNEYVSGGGMFNAFQSKKDEKNHVETSPLLRANPAAWSRSLNFHENC 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2734g00003 493 ProSitePatterns Zinc finger Dof-type signature. 145 181 IPR003851 GO:0003677|GO:0006355
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 394 417 - -
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 376 393 - -
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 1 143 - -
Gabi2734g00003 493 ProSiteProfiles Zinc finger Dof-type profile. 143 197 IPR003851 GO:0003677|GO:0006355
Gabi2734g00003 493 Pfam Dof domain, zinc finger 140 197 IPR003851 GO:0003677|GO:0006355
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 376 417 - -
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 283 309 - -
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 54 84 - -
Gabi2734g00003 493 PANTHER CYCLIC DOF FACTOR 2 4 492 IPR045174 GO:0003700|GO:0006355
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 279 309 - -
Gabi2734g00003 493 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2734g00003 Gabi-Chr2734 32306 35471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2734g00003 1 491 C2C2-Dof Transcription Factor Family AT3G47500 48.016 2.54e-134 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi2734g00003 zf-Dof 2.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2734g00003 - - gmx:778113 671.774