Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2689g00032 ATGAGGAAACAACAGCAACAAACTCAGCAATCAGAGTCTTTGAACTGCCCAAGATGTGACTCTACAAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCTTCGCCATTTCTGCAGAGCTTGTAAGAGGCATTGGATTAAAGGCGGAACTTTACGCAATGTTCTTGTTGGTGGTGGCAGGAAGAATAAGAGGGTAAAAAAATCAACCACCCCAACATCTTCCTCCACCAGCAAAGCCACCACCTCCTCTACTTGCACCACCACTGTCTCCACCTCAATTGGCAACATGGGTGGCGGGTCAAGTAGCCACGTGACAATGAATCCAACTCCTCTTGCAGTGAGTAATCAAAAAAGCATCCCTTCCTTTTTCTATCAAGTTCAAGCTTTGATTCGTCCACCATCTTTGCTGCTACAACAGAATCTAATGAATACTGGAGACTTAGAAAGCAAAGATTTTGGTATTGGTAATAGCATCTTTCTGAGTTCAACTTTGCCTCTTCCTCAAAACCAAAGCCTACACTTTCCCATCTCAACCTCAAGCTCTTTTGACACAATCCCTTGTGCAGTATCAACTTCTCTGCGATCCTCCAATGTTTATAACTATGGGGAGGAGTTTAAAACAATGGAGGAACCAACCATCAACAGCATAATGCCCAACACAAGTGGCAGTAACACACAACCATGGGAGATACCAGCAACAAGTGCTGGCATGGAAACTTCAAACTATTGGAATTGGGAGGACATTGATTCTTTGGTCTCAACTGATCTGAAAGATCCCTGGGATGATTCTGATATCAAACCATGA 813 0.4305 MRKQQQQTQQSESLNCPRCDSTNTKFCYYNNYNKSQLRHFCRACKRHWIKGGTLRNVLVGGGRKNKRVKKSTTPTSSSTSKATTSSTCTTTVSTSIGNMGGGSSSHVTMNPTPLAVSNQKSIPSFFYQVQALIRPPSLLLQQNLMNTGDLESKDFGIGNSIFLSSTLPLPQNQSLHFPISTSSSFDTIPCAVSTSLRSSNVYNYGEEFKTMEEPTINSIMPNTSGSNTQPWEIPATSAGMETSNYWNWEDIDSLVSTDLKDPWDDSDIKP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2689g00032 270 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Gabi2689g00032 270 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 180 IPR045174 GO:0003700|GO:0006355
Gabi2689g00032 270 Pfam Dof domain, zinc finger 13 66 IPR003851 GO:0003677|GO:0006355
Gabi2689g00032 270 MobiDBLite consensus disorder prediction 60 106 - -
Gabi2689g00032 270 MobiDBLite consensus disorder prediction 71 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2689g00032 Gabi-Chr2689 368948 369778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2689g00032 1 85 C2C2-Dof Transcription Factor Family AT5G60850 60.920 3.43e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi2689g00032 zf-Dof 1.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2689g00032 - - gmx:778119 329.331