Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2679g00029 ATGGGTTTCTCCTCTCTCCACGTCTGCATGGAATCATCACCAGATCATTGGCTGCAGGGCACAATTCACGAGGAGTCTGGGATGGATTCTTCTTCTTCACCATGTGGTGACATGCTTCAATGCTCGAGGCCCATGATAGAGAGGAAGCTAAGACCCCCTAATGACCAAGCCCTCAAGTGCCCCAGGTGTGATTCAACTCACACCAAGTTCTGTTACTACAACAACTATAGTCTCTCTCAGCCAAGGTACTTTTGCAAGACTTGTAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATCCCTGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTTTCTACCAAGAAACCCAATGACCAATCACCTATTAATCAAAACCAACCAGATCCTAGAACCTCTTACAATCACAACCCCAATGATCTTCAACTTTCTTACCCAGATGTGCAATTTTCCCATCTCAACAATTTACTCGGGACTAATGCAGGAGCACTTCGAAACCCTAATTTTATGGAGAGTACTGAGTATAACATGGGAATTCTCGAGAACCCTAGGCCTATTGACTTCATGGAAAATAACGTGGTGGAGGGTATAATTAGGACTTCAAGGAATTTTGATTTTTTCGGAAATAGCGATATGGGTGTGGGTGATATGAGTGGTTACAATGGGTTGCCATCAAATTATCAAGGTCTTTGCTCTTCAGCATTTGGGGGCATGTCCCTTGATGGAAGCAATGGTGGAAATTATATAATGGAATCTTGCCAGAGACTGATGTTGCCGTATGATGCATGTGACAACCGCAACGGTTCAATTGATATGAAGCCAAACCCTAAACTATTGTCCCTTGAATGGCACTCTGATGCTGAAAAAGAGTCATTTGGAGGATATCTTGACGGCTCAGGATCATGGACTGGCGTGATGAATGGCTATGGATCTTCCACAACAAATCCTATGGTCTAG 960 0.4406 MGFSSLHVCMESSPDHWLQGTIHEESGMDSSSSPCGDMLQCSRPMIERKLRPPNDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTKKPNDQSPINQNQPDPRTSYNHNPNDLQLSYPDVQFSHLNNLLGTNAGALRNPNFMESTEYNMGILENPRPIDFMENNVVEGIIRTSRNFDFFGNSDMGVGDMSGYNGLPSNYQGLCSSAFGGMSLDGSNGGNYIMESCQRLMLPYDACDNRNGSIDMKPNPKLLSLEWHSDAEKESFGGYLDGSGSWTGVMNGYGSSTTNPMV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2679g00029 319 MobiDBLite consensus disorder prediction 117 142 - -
Gabi2679g00029 319 MobiDBLite consensus disorder prediction 103 142 - -
Gabi2679g00029 319 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Gabi2679g00029 319 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Gabi2679g00029 319 Pfam Dof domain, zinc finger 55 112 IPR003851 GO:0003677|GO:0006355
Gabi2679g00029 319 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 166 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2679g00029 Gabi-Chr2679 301238 302720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2679g00029 1 319 C2C2-Dof Transcription Factor Family AT5G62940 39.153 9.25e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi2679g00029 zf-Dof 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2679g00029 - - gmx:100815061 469.544